Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2708 ATGGTGAAAGCAGCAAGTGAAAGTGCGAGCGGTGCAGTCCCTGAATCCGTCATTGATTCAGTGAACGASACTCTCTCAAACCTTCAAGAATTGAAGCAACACTTTCAGCAATTCATGCCTCTCTTCTCCGACCCTCAAGTCCTCTCTCAAATGCCCCCTCTCCACCGTGCTCACTCTTTCTTCCTCCTCAGCCAAATCACTTCTAATCTTCTCGCGTTGAATTTGAGGTGTAGCGGGGTTCACCCAGATGATCATCCTATTAAATCAGAGCTTGATAGAGTGAACTTATATCAAGACAAACTGGAACGTTTGCTAGATTTAATGCAAGCTCCACTTCGACCGTCTACCACCTTGAATTATCAGGCCGCTACGCGATTTATAGAACACTCTCTCCCCGACCTCACTCAAGAGCAGAGGCAAAATATGAGGAGCATAAGTAGAGGGGAGAGACRTCAAGGGYGTGCTGGTCAAAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAAATGCCACCAAGGAATTCTTGGAGAAAGCAGCCCTTGAGCTTTTTGGTAATAATCCTGACAGTATTAAGGGACCATTACGATTTGACATGTCAGATGACGACAGCCATGATGATGACGACAACGACAATGAACAAACTGTAGCCTGA 657 0.4505 MVKAASESASGAVPESVIDSVNXTLSNLQELKQHFQQFMPLFSDPQVLSQMPPLHRAHSFFLLSQITSNLLALNLRCSGVHPDDHPIKSELDRVNLYQDKLERLLDLMQAPLRPSTTLNYQAATRFIEHSLPDLTQEQRQNMRSISRGERXQGXAGQKRKYQSSEKQSVQNATKEFLEKAALELFGNNPDSIKGPLRFDMSDDDSHDDDDNDNEQTVA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2708 218 MobiDBLite consensus disorder prediction 133 147 - -
Amo20g2708 218 MobiDBLite consensus disorder prediction 203 218 - -
Amo20g2708 218 MobiDBLite consensus disorder prediction 157 174 - -
Amo20g2708 218 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 203 IPR011082 -
Amo20g2708 218 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 203 - -
Amo20g2708 218 MobiDBLite consensus disorder prediction 133 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2708 Amo-Chr20 124920669 124924051 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2708 K12592 - gmx:100795174 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2708 20 124920669 124924051 Amo20g2708 20 124920669 124924051 ECH
Amo10g2265 10 79511742 79513299 Amo20g2708 20 124920669 124924051 hybridization
Amo16g3739 16 148755884 148758982 Amo20g2708 20 124920669 124924051 PCT
Amo20g2708 20 124920669 124924051 Amo16g3739 16 148755884 148758982 PCT