Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2265 ATGGTGAAAGCAGCAAGTGAAAGTGCGAGCGGTGCAGTCCCTGAATCCGTCATTGATTCAGTGAACGACACTCTCTCAAACCTTCAAGAATTGAAGCAACACTTTCAGCAATTCATGCCTCTCTTCTCCGACCCTCAAGTCCTCTCTCAAATGCCCCCTCTCCACCGTGCTCACTCTTTCTTCCTCCTCAGCCAAATCACTTCTAATCTTCTCGCGTTGAATTTGAGGTGTAGCGGGGTTCACCCAGATGATCATCCTATTAAATCAGAGCTTGATAGAGTGAACTTATATCAAGACAAACTGGAACGTTTGCTAGATTTAATGCAAGCTCCACTTCGACCGTCTACCACCTTGAATTATCAGGCCGCTACGCGATTTATAGAACACTCTCTCCCCGACCTCACTCAAGAGCAGAGGCAAAATATGAGGAGCATAAGTAGAGGGGAGAGACATCAAGGGCGTGCTGGTCAAAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAAATGCCACCAAGGAATTCTTGGAGAAAGCAGCCCTTGAGCTTTTTGGTAATAATCCTGACAGTATTAAGGGACCATTACGATTTGACATGTCAGATGACGACAGCCATGATGATGACGACAACGACAATGAACAAACTGTAGCCTGA 657 0.4536 MVKAASESASGAVPESVIDSVNDTLSNLQELKQHFQQFMPLFSDPQVLSQMPPLHRAHSFFLLSQITSNLLALNLRCSGVHPDDHPIKSELDRVNLYQDKLERLLDLMQAPLRPSTTLNYQAATRFIEHSLPDLTQEQRQNMRSISRGERHQGRAGQKRKYQSSEKQSVQNATKEFLEKAALELFGNNPDSIKGPLRFDMSDDDSHDDDDNDNEQTVA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2265 218 MobiDBLite consensus disorder prediction 203 218 - -
Amo10g2265 218 MobiDBLite consensus disorder prediction 131 172 - -
Amo10g2265 218 MobiDBLite consensus disorder prediction 143 161 - -
Amo10g2265 218 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 203 - -
Amo10g2265 218 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 203 IPR011082 -
Amo10g2265 218 MobiDBLite consensus disorder prediction 186 218 - -
Amo10g2265 218 Pfam Sas10/Utp3/C1D family 18 100 IPR007146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2265 Amo-Chr10 79511742 79513299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2265 K12592 - gmx:100795174 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2265 10 79511742 79513299 Amo20g2708 20 124920669 124924051 hybridization
Amo16g3739 16 148755884 148758982 Amo10g2265 10 79511742 79513299 PCT
Amo10g2265 10 79511742 79513299 Amo16g3739 16 148755884 148758982 PCT