Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3739 GTCACCAACATTTCTACTTCCCCTGAGACTAAAACCGAAAGAGAGACACAGAAAATGGCGAGGGGAAGCGAAAGTGTGGGTGAGGGCGTACCGAAAGAGATGAGCGAAGCACTGAGGCGCACGGTAGCCAGCCTGGAGAATCTGGAAGCAGAGTTGCCGAATATTCTGTCTCTCTCAAACCCTTTCATCCTCTCTAAAATGCCTCCTCTTCAACGCGCTCACTCTCTCTTAACCCTTGCCAACATCACTTCCACCCTTTTCTCATTGAAGTTGAGATGCAAAGGGACTAATCCAGATTATCATCCCCTCAAATCTGAACTTGACAGGTTAAAAGTTTACCAACGCAAACTGGAACCCTTTGGGGATGTAGGTCAAGCTCTACCACTGCCTTCTTCTTTCTTGGATGAGCAGGCTTCTGTTGACCACTCCTTAAGTGACCTCACTTCAGTACAAAGAAAAGAAATGGCTAACATGAGCATTGAGGAGGTACCAACGATGAGCAACTATCAGGAGCAGGCTGGTCAGAAGAGAAAGCATCCATTTTCTGAAGAACACCCTATTCAAGTTGATGCTGAGGTGCACGTGAAGAAAGAACCACTTGAGGTTTTTGGTCATAACAATGGAAAAACTGAGGAACCAATAGTAATTGACATTTCAGATGATGACGAGTGA 672 0.4568 VTNISTSPETKTERETQKMARGSESVGEGVPKEMSEALRRTVASLENLEAELPNILSLSNPFILSKMPPLQRAHSLLTLANITSTLFSLKLRCKGTNPDYHPLKSELDRLKVYQRKLEPFGDVGQALPLPSSFLDEQASVDHSLSDLTSVQRKEMANMSIEEVPTMSNYQEQAGQKRKHPFSEEHPIQVDAEVHVKKEPLEVFGHNNGKTEEPIVIDISDDDE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3739 223 MobiDBLite consensus disorder prediction 200 223 - -
Amo16g3739 223 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 143 223 - -
Amo16g3739 223 MobiDBLite consensus disorder prediction 1 35 - -
Amo16g3739 223 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 143 223 IPR011082 -
Amo16g3739 223 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 31 123 - -
Amo16g3739 223 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 31 123 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3739 Amo-Chr16 148755884 148758982 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3739 K12592 - gmx:100500667 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3739 16 148755884 148758982 Amo16g3739 16 148755884 148758982 ECH
Amo16g3739 16 148755884 148758982 Amo10g2265 10 79511742 79513299 PCT
Amo16g3739 16 148755884 148758982 Amo20g2708 20 124920669 124924051 PCT
Amo10g2265 10 79511742 79513299 Amo16g3739 16 148755884 148758982 PCT
Amo20g2708 20 124920669 124924051 Amo16g3739 16 148755884 148758982 PCT