Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2645 ATGTCATCACCATTCCCTTCCTGCTTTCGGCCATCCCACACCCGCCGTAATTGTCCTCCACCACCGGCGCCACCAGGCTCCTCCAACCCCAACCTGACCACATACCTGTACCACACCGACACGGGCCTCGTGACTCTAACATGGTCACGCTCTATCTTAGGCCGCTCCCTCCACGTCCAGGTCCACAACCACAACCCCTTCGATTCCCCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCCTCCTTTCAACTTCACATAAAGCCCTTCATATTCTGGAAGAAGCACGGATCCAAAACCCTCTCTTCCACCACGCGACTCTTCTGGAACCTCTCCAAGGCCAAGTTCTCTTCCTCCTTCTCCCCSGAACCCCACTCCTCCTTCTACCTYGCKCTCGTCGTCCACAACCGCATCGTTCTCCTCCTCGGCGATTCCCCCAAAGACGCCTACTCCAAGTCCAAGGCTCTCCACGCTAACAACCCCCACTCCCTCCTCCTCAAGAAGGAACACGTCTTTGCCGACACCGTTTACTCCACCACCGCCATTTTCGGCGGCAAGACCCGCCGTATTCAAATCGACTGCGGCTCCTCCAGGGATAACGACTCTGCCTCCTCCAAGCTCTCTTTCTCCGTCGACGGCGACAGGGTGCTGCAGRTAAAGCGCCTCAAGTGGAAGTTCAGGGGCAATGAGAGAGTTGAAATCGACGGCGTTCCGGTTCAGATCTCGTGGGACGTGTACAACTGGCTCTTCGACAAGGATAGTAAYGGCGATGGGCACGCCATTTTCATGTTCAAGTTCGAGGCGGATGAACATGGCGTGGACAGGAACGTCGTGAATCCATGGGCGCAGCAGAACTGGAACTTGGGTTTGAGTGGCTCCTGCGACTGGGCCAAGATGTCATCTTCTTCCGTGTCGGTGGGTTCCTCCGCCGGGTCATTCGGCGGAAGCTCCTCCGTGTTGGAATGGTCCAGTGTGGAGGAGAACGAGTTGGTGGATCCCGTTGGCTTCTCTCTCATTGTTTATGCATGGAAGCGCTGA 1038 0.5568 MSSPFPSCFRPSHTRRNCPPPPAPPGSSNPNLTTYLYHTDTGLVTLTWSRSILGRSLHVQVHNHNPFDSPSSSSSSSPSSSSFQLHIKPFIFWKKHGSKTLSSTTRLFWNLSKAKFSSSFSPEPHSSFYLALVVHNRIVLLLGDSPKDAYSKSKALHANNPHSLLLKKEHVFADTVYSTTAIFGGKTRRIQIDCGSSRDNDSASSKLSFSVDGDRVLQXKRLKWKFRGNERVEIDGVPVQISWDVYNWLFDKDSNGDGHAIFMFKFEADEHGVDRNVVNPWAQQNWNLGLSGSCDWAKMSSSSVSVGSSAGSFGGSSSVLEWSSVEENELVDPVGFSLIVYAWKR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2645 345 MobiDBLite consensus disorder prediction 1 32 - -
Amo20g2645 345 Pfam Plant protein of unknown function (DUF868) 29 344 IPR008586 -
Amo20g2645 345 PANTHER OS08G0422401 PROTEIN 2 344 - -
Amo20g2645 345 PANTHER EXPRESSED PROTEIN 2 344 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2645 Amo-Chr20 122810562 122812855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2645 5 265 EF-hand Containing Proteins AT5G28150 35.926 6.31e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2645 - - cam:101507611 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2645 20 122810562 122812855 Amo20g2645 20 122810562 122812855 ECH
Amo10g2183 10 76711009 76712037 Amo20g2645 20 122810562 122812855 hybridization
Amo16g3695 16 148034385 148035901 Amo20g2645 20 122810562 122812855 PCT
Amo06g2820 06 93421172 93423450 Amo20g2645 20 122810562 122812855 PCT
Amo20g2645 20 122810562 122812855 Amo16g3695 16 148034385 148035901 PCT
Amo20g2645 20 122810562 122812855 Amo06g2820 06 93421172 93423450 PCT