Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2183 ATGTCATCACCATTCCCTTCCTGCTTTCGGCCATCCCACACCCGCCGTAATTGTCCTCCACCACCGGCGCCACCAGGCTCCTCCAACCCCAACCTGACCACATACCTGTACCACACCGACACGGGCCTCGTGACTCTAACATGGTCACGCTCTATCTTAGGCCGCTCCCTCCACGTCCACTTCTCTTCCTCCTTCTCCCCGGAACCCCACTCCTCCTTCTACCTTGCTCTCGTCGTCCACAACCGCATCGTTCTCCTCCTCGGCGATTCCCCCAAAGACGCCTACTCCAAGTCCAAGGCTCTCCACGCTAACAACCCCCACTCCCTCCTCCTCAAGAAGGAACACGTCTTTGCCGACACCGTTTACTCCACCACCGCCATTTTCGGCGGCAAGACCCGCCGTATTCAAATCGACTGCGGCTCCTCCAGGGATAACGACTCTGCCTCCTCCAAGCTCTCTTTCTCCGTCGACGGCGACAGGGTGCTGCAGATAAAGCGCCTCAAGTGGAAGTTCAGGGGCAATGAGAGAGTTGAAATCGACGGCGTTCCGGTTCAGATCTCGTGGGACGTGTACAACTGGCTCTTCGACAAGGATAGTAACGGCGATGGGCACGCCATTTTCATGTTCAAGTTCGAGGCGGATGAACATGGCGTGGACAGGAACGTCGTGAATCCATGGGCGCAGCAGAACTGGAACTTGGGTTTGAGTGGCTCCTGCGACTGGGCCAAGATGTCGTCTTCTTCCGTCTCGGTGGGTTCCTCCGCCGGGTCATTCGGCGGAAGCTCCTCCGTGTTGGAATGGTCCAGTGTGGAGGAGAACGAGTTGGTAGATCCCGTTGGCTTCTCACTCATTGTTTATGCATGGAAGCGCTGA 873 0.5727 MSSPFPSCFRPSHTRRNCPPPPAPPGSSNPNLTTYLYHTDTGLVTLTWSRSILGRSLHVHFSSSFSPEPHSSFYLALVVHNRIVLLLGDSPKDAYSKSKALHANNPHSLLLKKEHVFADTVYSTTAIFGGKTRRIQIDCGSSRDNDSASSKLSFSVDGDRVLQIKRLKWKFRGNERVEIDGVPVQISWDVYNWLFDKDSNGDGHAIFMFKFEADEHGVDRNVVNPWAQQNWNLGLSGSCDWAKMSSSSVSVGSSAGSFGGSSSVLEWSSVEENELVDPVGFSLIVYAWKR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2183 290 MobiDBLite consensus disorder prediction 1 30 - -
Amo10g2183 290 Pfam Plant protein of unknown function (DUF868) 61 289 IPR008586 -
Amo10g2183 290 PANTHER OS08G0422401 PROTEIN 66 289 - -
Amo10g2183 290 PANTHER OS08G0422401 PROTEIN 2 63 - -
Amo10g2183 290 PANTHER EXPRESSED PROTEIN 66 289 IPR008586 -
Amo10g2183 290 PANTHER EXPRESSED PROTEIN 2 63 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2183 Amo-Chr10 76711009 76712037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2183 5 210 EF-hand Containing Proteins AT5G28150 30.196 1.86e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2183 - - gmx:100783731 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2183 10 76711009 76712037 Amo20g2645 20 122810562 122812855 hybridization
Amo16g3695 16 148034385 148035901 Amo10g2183 10 76711009 76712037 PCT
Amo06g2820 06 93421172 93423450 Amo10g2183 10 76711009 76712037 PCT
Amo10g2183 10 76711009 76712037 Amo16g3695 16 148034385 148035901 PCT
Amo10g2183 10 76711009 76712037 Amo06g2820 06 93421172 93423450 PCT