Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2575 ATGCAGCTGGAAGAGATTAAGGCAGCAGTTTCTGCTCTGTGGAACACCCGGGGGTTGAACTGGCCAAGTACGTTCGAGCAACACAGGCAGAGAAGTGGGGATTTGGACTTGCTTGATTGGCTTAGAGCCATGTTTGGCTTCCAGAAGGACAATGTCAGGAACCAAAGAGAGCACTTGATTCTGCTTCTTGCTAACTCTCACATAAGGCTCAATCCAAAACCTGAGCCTCTCAACAAGCTGGATGACCGGGCTGTTGACGAAAAGATGAATGAACTCTTTAAGAATTACAAGAATTGGTGCAAGTTTTTAGGAAGAAAACATAGTTTACGACTCCCCCAGCAAGGTCAGCAAGAGATACAGCAGAGAAAGCTGCTATATATGGGGTTATATCTTCTCATATGGGGTGAAGCTTCCAATCTTCGTTTCATGCCAGAGTGCCTATGCTATATATTTCACAATATGGCCTATGAACTTAACGGTCTATTGGCCGGAAATGTTAGCATTGTCACTGGTGAAAATATCAAACCTTCCTATGGTGGTGAGGATGAGTCATTCCTTCGCAAAGTTGTAACTCCCATATACCGAGTTATTGAAAATGAAGCACAGCGGGGTAAAAATGGAACTGCACCCCACTCATCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACCTGATTGTTTTTCGCTTGGATGGCCCATGCGTGATGATGGTGATTTTTTCAAGTCCACATTTGTGTCACAGGGAAGACACGGTGCCCGTAAGAAAGCTGGGAAAACGGGCAAATCAAATTTTGTTGAGAGCCGTTCATTCTGGCACATCTTTCGCAGTTTTGATCGTCTCTGGACATTCTATATAATGGCGTTGCAGGTTATGATTATTATTTCGTGGAACAATACTCAATTGAACGAACTCTTTCAAAAACCACTCTTATTCAAACTCTCTAGTATATTCATCACAGCAGCCATACTACGCTTACTACAAGGTATCTTGGACTTGGTTCTGAACTTTCCTGGGTATCATCGTTGGAGATTCACTAATGTACTACGGCTTTTACTGAAAATAATTGTTAGCATACTTTGGGTCATAGTTCTTCCACTGTTGTATATTGGTTCCTTCGAGAATAATAATAATGTCCCAGAGTTTATCACGAAGATACTTTCGTTCTTGGGTGATACAAAGGGCCTTCCACAATTGTATTTATTGGCAGTTGCAGTGTACTTGCTTCCCAATGCATTGACAGTATTTCTCTTCTTCTTCCCAATGCTCAGGCGTTGGATTGAAAACTCAGACTGGCGTATTGTAAGATTCTTCATGTGGTGGGCTCAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAGAGTCAATTTTCTCTCTTTAGGTACACATTCTTTTGGCTGCTTCTTTTGGCTTCCAAAGTGGCATTTAGCTATTTCATCCAGATTAAACCTCTAGTGGAGCCAACTAAGGAGATAATGAGGATTCGCCATGTTGATTATGCTTGGCATGAGTTTTTCCCTAATGTTACACATAACTATGGTGCAGTCATTGCACTCTGGTCACCTGTAGTGCTGGTCTATTTCATGGACACTCAAATTTGGTATGCCATTTTCTCAACTTTGTCTGGTGGTGTTGTTGGAGCCTTTGATCGTTTAGGAGAGATTCGAACTTTGACCATGCTAAGATCACGGTTTCAGTCATTGCCCGGCGCATTTAACGCATTCTTGGTCCCTACTGACAAAAACCAGAAGAGGAGATTCTCTTTGTCAAAGCGTTTTGCTGAGGTTACTCCCAGTAGAAGGGTTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAATTATCTGTAGTTTCCGTGAGGAAGATATCATAAGTGATAGGGAGATGGATCTTTTGATGGTTCCTTACTCATTAGACCCTAGCTTGAAAATAATTCAATGGCCACCATTTTTGCTTGCAAGCAAGATTGCTGTAGCACTAGATATGGCAGCTCAATTTCATGGAAAGGACTCTGATCTTTGGAAGCGCATTTGTCATGATGAATATATGAAATGTGCTGTCATTGAATGCTATGAAGCTTTTAAGAATGTTCTAAATACTTTGGTGGTTGGTGACCTTGAGAAAAGGACGATCTCCGTGATCTTCAAGGAAGTTGAGAACAGCATCTCCAAGAATACCCTTCTTACAAATTTCCGAATGGCATTTTTGCCCAACCTTTGTAAGAAATTTGTTGAGCTTGTTGAAATTTTGAAAGATGCAGATCCTTCGAAGCGAGGAACAGTGGTAGTCTTATTGCAAGATATTTTAGAAGTATTTACCCGTGATATGATGGTGAATGACATTAGTGAGTTAGCAGAACTTAATCATAGTAGCAAGGACACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAGACCGGCCGTGTACTTCCCTCCTGTGCTTACAGCACAATGGGAGGAACAGATTAGACGCCTACATTTACTTTTGACAGTAAAGGAGTCTGCTATGGAGGTCCCAACAAACCTTGAGGCACGCAGAAGGATTACATTCTTCACCAATTCATTGTTCATGGATATGCCGCGTGCTCCAAGGGTTCGCAAAATGCTCTCATTCAGTGTCATGACTCCATACTATAGTGAAGAGACTGTCTATTCCAAGAATGACCTTGAGGTTGAAAATGAGGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAATGGAACAACTTCATGGAGCGACTTGATTGCAAGAAAGATAGCGAGGTCTGGGAGAAAGAGGAGAATGTGTTGCAATTACGTCACTGGGCCTCGTTAAGAGGACAAACTCTTTGCCGGACAGTTAGGGGAATGATGTACTACAGGCGAGCTCTTAAGCTCCAAGCTTTTCTTGATATGGCTAATGAAAGGGAGATACTGAATGGCTATAAGGCTGTTACTGTTCCATCCGAGGAAGATAAGAAGAGTAAGAGATCTCTGTATGCCAGTATCGAAGCTGTTGCTGACATGAAATTCACATATGTCGCCACGTGTCAGATCTATGGTAATCAGAAGCGCAGCGGAGACCGCCGGGCAACAGACATATTGAATTTGATGGTTAACAATCCTTCCCTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAAGCCGGAAAAGTACAGAAGGTTTATTATTCTGTGCTAGTCAAAGCTGTGGACAACCATGACCAGGAAATATATAGAATAAAATTGCCAGGTCCACCCAAGATAGGAGAAGGAAAACCTGAAAATCAAAATCATGCTATCATTTTCACTAGAGGGGAAGCTCTTCAGACAATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTAGAAGAATTTAATGAGGATCATGGCGTTCGTCGACCTACTATACTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGTTTTGTCACTATTGGCCAAAGAGTTCTTGCAAGACCCCTAAAGGTTCGGTTCCACTATGGTCATCCTGATGTTTTTGATAGAATTTTCCATATCACCCGTGGAGGTATCAGCAAGGCTTCTCGTGTAATAAATCTTAGTGAAGACATTTTTGCTGGATTCAACTCCACACTAAGGCGTGGAAACATTACTCATCATGAATACATCCAAGTTGGAAAGGGTAGAGATGTTGGTCTCAATCAAATCTCACTCTTTGAAGCAAAGGTGGCCTGTGGTAATGGAGAACAGACACTTAGCAGGGATGTCTACAGGCTGGGGCATCGTTTCGACTTTTTCCGCATGCTATCATTCTATTTCACATCTATTGGATTTTACTTCAGCTCAATGGTTGTGGCCCTCACTGTTTATGCATTCTTGTATGGCAAACTTTACCTGTCATTGAGTGGACTTGAGGCTGCAATAGTTAAATTGGCAAATAGAAGGGGAGATGAGGCACTGAGGGCAATAATGGCTTCACAATCCCTTGTTCAAATAGGACTATTAATGACTCTGCCCATGATCATGGAAATAGGACTTGAGAGAGGTTTCAGATCCGCTATGGGAGAGATGATAATAATGCAGTTGCAGCTAGCACCCGTTTTCTTCACTTTCTCTCTTGGAACCAAGTTGCACTACTACGGACGCACTCTTCTTCACGGAGGTGCAAAGTACAGAGCAACTGGTCGTGGCTTCGTTGTTCGCCACGAGAAGTTTGCTGAGAATTACAGGCTGTACTCTAGGAGTCACTTTGTGAAAGGGATTGAGCTTTTAATATTGCTCATAGTTTACAGGGCTTATGGTTCAGCAGCAATCGGTGGAGCTTACGCTTTCCTTTCATGGTCAATGTGGTTCTTGGTTTGTTCTTGGCTGTTTGCTCCTTTCCTTTTTAATCCATCTGGATTTGAGTGGCAGAAGATAGTTGAAGACTGGGATGACTGGAAGAAATGGATAAGTAGCCGAGGTGGCATTGGTGTTCCTGGAAATAAAAGCTGGGAATCATGGTGGGATGAGGAACAAGAGCATTTGCAATACACTGGGTTCATGGGAAGGTTTTGGGAGTGTTTCCTAGCCCTGCGTTTCTTTGTCTATCAATATGGCATTGTGTATCAGCTCCATATATCAAGAGGCGACAAGAGCATTGTGGTTTATGGTCTGTCCTGGCTTGTCATAGTAGCTATCATGATCACCTTGAAGATTGTGTCCTTGGGTAGCAAGAAGTTCAGCGCAGACTTCCAATTGATGTTCCGTCTTCTCAAATTCTTCCTATTTGTTGGAACCGTTGTCGCCTTTACCTTAATGTTTGTCTTGCTAGGTCTCACCGTTACTGACATATTTGCCAGCCTCTTAGCCTTTTTTCCAACAGGCTGGGCTCTTGTACAGATAGCACAAGCATGCAGGCCTATTGTGAAGGCCATAAGAATGTGGAGTTCTGTCAAAGCTTTAGCAAAAGGCTACGAATATCTGATGGGAGTTATTATCTTTGCACCTGTTGCTGTATTGGCATGGTTCCCTTTTGTATCAGAATTTCAAACTAGGCTTCTATTCAACCAAGCTTTCAGTAGAGGGCTTCAAATCCAGCGTATTTTATCTGGCGGTAAGAAGAATAAGTAA 5154 0.4226 MQLEEIKAAVSALWNTRGLNWPSTFEQHRQRSGDLDLLDWLRAMFGFQKDNVRNQREHLILLLANSHIRLNPKPEPLNKLDDRAVDEKMNELFKNYKNWCKFLGRKHSLRLPQQGQQEIQQRKLLYMGLYLLIWGEASNLRFMPECLCYIFHNMAYELNGLLAGNVSIVTGENIKPSYGGEDESFLRKVVTPIYRVIENEAQRGKNGTAPHSSWCNYDDLNEYFWSPDCFSLGWPMRDDGDFFKSTFVSQGRHGARKKAGKTGKSNFVESRSFWHIFRSFDRLWTFYIMALQVMIIISWNNTQLNELFQKPLLFKLSSIFITAAILRLLQGILDLVLNFPGYHRWRFTNVLRLLLKIIVSILWVIVLPLLYIGSFENNNNVPEFITKILSFLGDTKGLPQLYLLAVAVYLLPNALTVFLFFFPMLRRWIENSDWRIVRFFMWWAQPRIYVGRGMHESQFSLFRYTFFWLLLLASKVAFSYFIQIKPLVEPTKEIMRIRHVDYAWHEFFPNVTHNYGAVIALWSPVVLVYFMDTQIWYAIFSTLSGGVVGAFDRLGEIRTLTMLRSRFQSLPGAFNAFLVPTDKNQKRRFSLSKRFAEVTPSRRVEAAKFAQLWNEIICSFREEDIISDREMDLLMVPYSLDPSLKIIQWPPFLLASKIAVALDMAAQFHGKDSDLWKRICHDEYMKCAVIECYEAFKNVLNTLVVGDLEKRTISVIFKEVENSISKNTLLTNFRMAFLPNLCKKFVELVEILKDADPSKRGTVVVLLQDILEVFTRDMMVNDISELAELNHSSKDTGRQLFAGTDARPAVYFPPVLTAQWEEQIRRLHLLLTVKESAMEVPTNLEARRRITFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLDCKKDSEVWEKEENVLQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEREILNGYKAVTVPSEEDKKSKRSLYASIEAVADMKFTYVATCQIYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREAGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPPKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASRVINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDVYRLGHRFDFFRMLSFYFTSIGFYFSSMVVALTVYAFLYGKLYLSLSGLEAAIVKLANRRGDEALRAIMASQSLVQIGLLMTLPMIMEIGLERGFRSAMGEMIIMQLQLAPVFFTFSLGTKLHYYGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYSRSHFVKGIELLILLIVYRAYGSAAIGGAYAFLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWKKWISSRGGIGVPGNKSWESWWDEEQEHLQYTGFMGRFWECFLALRFFVYQYGIVYQLHISRGDKSIVVYGLSWLVIVAIMITLKIVSLGSKKFSADFQLMFRLLKFFLFVGTVVAFTLMFVLLGLTVTDIFASLLAFFPTGWALVQIAQACRPIVKAIRMWSSVKALAKGYEYLMGVIIFAPVAVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILSGGKKNK* 1718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2575 1717 SMART FKS1_dom1_2 121 237 IPR026899 -
Amo20g2575 1717 Coils Coil 1116 1136 - -
Amo20g2575 1717 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 1 1716 - -
Amo20g2575 1717 Pfam 1,3-beta-glucan synthase component 931 1531 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Amo20g2575 1717 Pfam 1,3-beta-glucan synthase component 840 927 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Amo20g2575 1717 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 123 234 IPR026899 -
Amo20g2575 1717 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2575 Amo-Chr20 120526922 120536996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2575 1 1717 Glycosyltransferase AT1G05570 61.473 0.0 2178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2575 K11000 - gmx:100777245 2934.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2575 20 120526922 120536996 Amo20g2575 20 120526922 120536996 ECH
Amo10g2085 10 74673633 74683283 Amo20g2575 20 120526922 120536996 hybridization
Amo13g3747 13 126570714 126576074 Amo20g2575 20 120526922 120536996 PCT
Amo03g2842 03 119311698 119316996 Amo20g2575 20 120526922 120536996 PCT