Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2842 GAGTTGGCAGAACTTAATCAAAGTAGCAAGGATACTGGACGACAAGTTTTTGCTGGTACTGAGATAAAACCTGCTATAGTGTACCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATAAGACGGCTTTATCTAGTATTGACTGTGAGGGAATCTGCCAATGAGGTTCCAACAAACGGTGAAGTACGGAGAAGGATTGCATTCTTTTCCAATTCATTGTTCATGGAGATGCCACGTGCTCCACCTGTGCGTGAAATGCTCTCATTCAGTGTCCTAACGCCATACTATAGTGAAGAGACTGTATTTTCTAAGAATGACCTTGAGATTGAGAATGAAGATGGCGTGTCAATCATATATTACCTGCAAAAGATCTTCCCTGATGAGTGGAATAACTTCATGGAGCGACTTGAGTGTAAGAAAGATAGTGAGGTATGGGAGAAAGATGAGAATGTATTGCAGTTACGTCACTGGGCGTCGTTGAGAGGACAAACTCTTAGTAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATAAAGCTCCAGGCATTTCTTGATATGGCTAACGAACAAGAAATACTCGATGGCTATAAAGCTATTACAGTTCCATCTGAGCAAGATAAAAAGAGTCATAAATCCCTATATGGCAATTTAGAGGCCATGGCTGACATGAAATTCACATACGTTGCTACCTGTCAAAACTATGGGAATCAGAAGCGCAGTGGAGACCGTCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCGCTTCGTGTTGCATATATTGACGAAGTTGAAGAAAGAGAGAGAGAGGGTGATAAAGTACAGAAAGTTTATTATTCTGTACTGATCAAATCTGTAGACAATCTTGACCAAGAAATATTTCGAATTAAACTTCCTGGTCCGGCAAAGTTAGGAGAAGGAAAGCCTGAAAACCAAAATCATGCAGTTATTTTTACCAGGGGGGAAGCTCTTCAGACTATTGACATGAACCAGGATAACTACTTAGAAGAAGCTCTGAAGATGCGTAACCTTCTGGAAGAATTTCATGAGGATCATGGAGTGCACCCACCTAGCATTTTAGGTGTACGTGAACATATCTTTACTGGCAGTGTCTCCTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACTATTGGTCAGAGAGTTCTTGCAAGACCCCTGAAGGTTCGGTTCCACTATGGTCATCCTGATGTTTTTGATAGAATTTTCCATTTCACCCGTGGAGGTTTCAGCAAGGCTTCTCGTGGCATCAATTTAAGTGAGGACATATTTGCTGGATTCAACTCAACACTAAGACGTGGAAACGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTTGGCCTCAATCAAATTTCTCTTTTTGAAGCAAAAGTGGCCTGTGGCAATGGAGAGCAGACACTAAGCAGGGATATATACCGGCTGGGGCATCGATTTGATTTTTTCCGAATGCTATCATTCTATTTTACAACTGTCGGATTTTATGTCAGCTCTATGGCAGTGTCCCTTACAGTTTATGCTTTCCTATATGGAAAACTCTATCTGTCATTGAGTGGATTTGAAAATGCGATAGTTAAACTGGCAAAGAGAAAGGGTGACGATCCACTAAAGGCAGCAATGGCTTCACAAAGTCTTGTTCAAATAGGCCTTCTAATGACTCTGCCCATGGTCATGGAAATAGGATTAGAAAGAGGGTTCAGAACTGCTATAGGTGACCTCATAATAATGCAGCTGCAGCTAGCACCCGTTTTTTTCACTTTCTCACTAGGATCGAAGATGCACTACTTTGGGCGCACTCTGTTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAGAGGTTCGCAGAGAATTACAGGATGTACTCTAGGAGCCACTTTGTAAAAGGGTTAGAGCTTGCTGTATTGCTTATATGTTATAAGCTTTATGGATCAGCAGCTCCTGATTCAACTGCATATCTTCTTCTCTCAGGGTCAATGTGGTTTTTGGTTTGTTCTTGGTTGTTTAGTCCTTTCCTTTTCAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGACTGGGATGACTGGACAAAATGGATGAATAGTGGAGGTGGTATTGGTGTTCCTGCTACCAAGAGCTGGGAATCATGGTGGAATGAGGAACAAGAGCATTTGCAGTTTACTGGGTTTTTGGGGAGGACTTCGGAGGTTTATGGTCTGTCCTGGCTAGTCATAGTAGCTGTTATGATCATTTTGAAGATTGTGTCTATGGGTAGAAAGAAGTTCAGTGCTGATTTTCAGCTGATGTTTCGTCTTCTCAAAGTGCTTTTGTTCATTGGAAGCATTGTTGCTCTAGTCTTGATGTTTAATCTACTTAGTCTCACAGTTCAAGACATTCTTAGGAGCCTCCTAGCTTTTTTACCAACAGGATGGGCACTTATACAGATATCTCAAGCATGTAGGCCATTGGTGAAGGCAATTGGAATGTGGGGGTCCGTCAAAGCTTTATCAAGAGGGTATGAATACGTGATGGGATTGCTTATCTTTGGACCAGTGGCCATACTAGCTTGGTTCCCGTTTGTTTCAGAATTCCAAACTCGGCTGCTATTCAATCAAGCGTTCAGCCGAGGACTTCAAATCCAGCGTATTCTGGCTGGTGGAAAGAAGCATAAATAA 2727 0.4235 ELAELNQSSKDTGRQVFAGTEIKPAIVYPPVVTAQWEEQIRRLYLVLTVRESANEVPTNGEVRRRIAFFSNSLFMEMPRAPPVREMLSFSVLTPYYSEETVFSKNDLEIENEDGVSIIYYLQKIFPDEWNNFMERLECKKDSEVWEKDENVLQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEQEILDGYKAITVPSEQDKKSHKSLYGNLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREREGDKVQKVYYSVLIKSVDNLDQEIFRIKLPGPAKLGEGKPENQNHAVIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFHEDHGVHPPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGFSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMAVSLTVYAFLYGKLYLSLSGFENAIVKLAKRKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTAIGDLIIMQLQLAPVFFTFSLGSKMHYFGRTLLHGGAKYRATGRGFVVRHERFAENYRMYSRSHFVKGLELAVLLICYKLYGSAAPDSTAYLLLSGSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWTKWMNSGGGIGVPATKSWESWWNEEQEHLQFTGFLGRTSEVYGLSWLVIVAVMIILKIVSMGRKKFSADFQLMFRLLKVLLFIGSIVALVLMFNLLSLTVQDILRSLLAFLPTGWALIQISQACRPLVKAIGMWGSVKALSRGYEYVMGLLIFGPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHK* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2842 908 PANTHER CALLOSE SYNTHASE 5 2 907 - -
Amo03g2842 908 Pfam 1,3-beta-glucan synthase component 56 751 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Amo03g2842 908 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 2 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2842 Amo-Chr3 119311698 119316996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2842 33 908 Glycosyltransferase AT1G05570 63.261 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2842 K11000 - gmx:100779472 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3747 13 126570714 126576074 Amo03g2842 03 119311698 119316996 hybridization
Amo03g2842 03 119311698 119316996 Amo10g2085 10 74673633 74683283 PCT
Amo03g2842 03 119311698 119316996 Amo20g2575 20 120526922 120536996 PCT