Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2085 ATGCAGCTGGAAGAGATTAAGGCAGCAGTTTCTGCTCTGTGGAACACCCGGGGGTTGAACTGGCCAAGTACGTTCGAGCAACACAGGCAGAGAAGTGGGGATTTGGACTTGCTTGATTGGCTTAGAGCCATGTTTGGCTTCCAGAAGGACAATGTCAGGAACCAAAGAGAGCACTTGATTCTGCTTCTTGCTAACTCTCATATAAGGCTCAATCCAAAACCTGAGCCTCTCAACAAGTTGGATGACCGGGCTGTTGACGAAAAGATGAATGAACTCTTTAAGAATTACAAGAATTGGTGCAAGTTTTTAGGAAGAAAACATAGTTTACGACTCCCCCAGCAAGGTCAGCAAGAGATACAGCAGAGAAAGCTGCTATATATGGGGTTATATCTTCTCATATGGGGTGAAGCTTCCAATCTTCGTTTCATGCCAGAGTGCCTATGCTATATATTTCACAATATGGCCTATGAACTTAACGGTCTATTGGCCGGAAATGTTAGCATTGTCACTGGTGAAAATATCAAACCTTCCTATGGTGGTGAGGATGAGTCATTCCTTCGCAAAGTTGTAACTCCCATATACCGAGTTATTGAAAATGAAGCACAGCGGGGTAAAAATGGAACTGCACCCCACTCATCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACCTGATTGTTTTTCGCTTGGATGGCCCATGCGTGATGATGGTGATTTTTTCAAGTCCACATTTGTGTCACAGGGAAGACACGGTGCCCGTAAGAAAGCTGGGAAAACGGGCAAATCAAATTTTGTTGAGAGCCGTTCATTCTGGCACATCTTTCGCAGTTTTGATCGTCTCTGGACATTCTATATAATGGCGTTGCAGGTTATGATTATTATTTCGTGGAACAATACTCAATTGAACGAACTCTTTCAAAAACCACTCTTATTCAAACTCTCTAGTATATTCATCACAGCAGCCATACTACGCTTACTACAAGGTATCTTGGACTTGGTTCTGAACTTTCCTGGGTATCATCGTTGGAGATTCACTAATGTACTACGGCTTTTACTGAAAATAATTGTTAGCATACTTTGGGTCATAGTTCTTCCACTGTTGTATATTGGTTCCTTCGAGAATAATAATAATGTCCCAGAGTTTATCACGAAGATACTTTCGTTCTTGGGTGATACAAAGGGCCTTCCACAATTGTATTTATTGGCAGTTGCAGTGTACTTGCTTCCCAATGCATTGACAGTATTTCTCTTCTTCTTCCCAATGCTCAGGCGTTGGATTGAAAACTCAGACTGGCGTATTGTAAGATTCTTCATGTGGTGGGCTCAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAGAGTCAATTTTCTCTCTTTAGGTACACATTCTTTTGGCTGCTTCTTTTGGCTTCCAAAGTGGCATTTAGCTATTTCATCCAGATTAAACCTCTAGTGGAGCCAACTAAGGAGATAATGAGGATTCGCCATGTTGATTATGCTTGGCATGAGTTTTTCCCTAATGTTACACATAACTATGGTGCAGTCATTGCACTCTGGTCACCTGTAGTGCTGGTCTATTTCATGGACACTCAAATTTGGTATGCCATTTTCTCAACTTTGTCTGGTGGTGTTGTTGGAGCCTTTGATCGTTTAGGAGAGATTCGAACTTTGACCATGCTAAGATCACGGTTTCAGTCATTGCCCGGCGCATTTAACGCATTCTTGGTCCCTACTGACAAAAACCAGAAGAGGAGATTCTCTTTGTCAAAGCGTTTTGCTGAGGTTACTCCCAGTAGAAGGGTTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAATTATCTGTAGTTTCCGTGAGGAAGATATCATAAGTGATAGGGAGATGGATCTTTTGATGGTTCCTTACTCATTAGACCCTAGCTTGAAAATAATTCAATGGCCACCATTTTTGCTTGCAAGCAAGATTGCTGTAGCACTAGATATGGCAGCTCAATTTCATGGAAAGGACTCTGATCTTTGGAAGCGCATTTGTCATGATGAATATATGAAATGTGCTGTCATTGAATGCTATGAAGCTTTTAAGAATGTTCTAAATACTTTGGTGGTTGGTGACCTTGAGAAAAGGACGATCTCCGTGATCTTCAAGGAAGTTGAGAACAGCATCTCCAAGAATACCCTTCTTACAAATTTCCGAATGGCATTTTTGCCCAACCTTTGTAAGAAATTTGTTGAGCTTGTTGAAATTTTGAAAGATGCAGATCCTTCGAAGCGAGGAACAGTGGTAGTCTTATTGCAAGATATTTTAGAAGTATTTACCCGTGATATGATGGTGAATGACATTAGTGAGTTAGCAGAACTTAATCATAGTAGCAAGGACACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAGACCGGCCGTGTACTTCCCTCCTGTGCTTACAGCACAATGGGAGGAACAGATTAGACGCCTACATTTACTTTTGACAGTAAAGGAGTCTGCTATGGAGGTCCCAACAAACCTTGAGGCACGCAGAAGGATTACATTCTTCACCAATTCATTGTTCATGGATATGCCGCGTGCTCCAAGGGTTCGCAAAATGCTCTCATTCAGTGTCATGACTCCATACTATAGTGAAGAGACTGTCTATTCCAAGAATGACCTTGAGGTTGAAAATGAGGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGGTAGCAATAGCTTACTCTATACAATTAATTGCCTAAGAAGTGTATTTATAGATGAATGGAACAACTTCATGGAGCGACTTGATTGCAAGAAAGATAGCGAGGTCTGGGAGAAAGAGGAGAATGTGTTGCAATTACGTCACTGGGCCTCGTTAAGAGGACAAACTCTTTGCCGGACAGTTAGGGGAATGATGTACTACAGGCGAGCTCTTAAGCTCCAAGCTTTTCTTGATATGGCTAATGAAAGGGAGATACTGAATGGCTATAAGGCTGTTACTGTTCCATCCGAGGAAGATAAGAAGAGTAAGAGATCTCTGTATGCCAGTATCGAAGCTGTTGCTGACATGAAATTCACATATGTCGCCACGTGTCAGATCTATGGTAATCAGAAGCGCAGCGGAGACCGCCGGGCAACAGACATATTGAATTTGATGGTTAACAATCCTTCCCTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAAGCCGGAAAAGTACAGAAGGTTTATTATTCTGTGCTAGTCAAAGCTGTGGACAACCATGACCAGGAAATATATAGAATAAAATTGCCAGGTCCACCCAAGATAGGAGAAGGAAAACCTGAAAATCAAAATCATGCTATCATTTTCACTAGAGGGGAAGCTCTTCAGACAATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTAGAAGAATTTAATGAGGATCATGGCGTTCGTCGACCTACTATACTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGTTTTGTCACTATTGGCCAAAGAGTTCTTGCAAGACCCCTAAAGGTTCGGTTCCACTATGGTCATCCTGATGTTTTTGATAGAATTTTCCATATCACCCGTGGAGGTATCAGCAAGGCTTCTCGTGTAATAAATCTTAGTGAAGACATTTTTGCTGGATTCAACTCCACACTAAGGCGTGGAAACATTACTCATCATGAATACATCCAAGTTGGAAAGGGTAGAGATGTTGGTCTCAATCAAATCTCACTCTTTGAAGCAAAGGTGGCCTGTGGTAATGGAGAACAGACACTTAGCAGGGATGTCTACAGGCTGGGGCATCGTTTCGACTTTTTCCGCATGCTATCATTCTATTTCACATCTATTGGATTTTACTTCAGCTCAATGGTTGTGGCCCTCACTGTTTATGCATTCTTGTATGGCAAACTTTACCTGTCATTGAGTGGACTTGAGGCTGCAATAGTTAAATTGGCAAATAGAAGGGGAGATGAGGCACTGAGGGCAATAATGGCTTCACAATCCCTTGTTCAAATAGGACTATTAATGACTCTGCCCATGATCATGGAAATAGGACTTGAGAGAGGTTTCAGATCCGCTATGGGAGAGATGATAATAATGCAGTTGCAGCTAGCACCCGTTTTCTTCACTTTCTCTCTTGGAACCAAGTTGCACTACTACGGACGCACTCTTCTTCACGGAGGTGCAAAGTACAGAGCAACTGGTCGTGGCTTCGTTGTTCGCCACGAGAAGTTTGCTGAGAATTACAGGCTGTACTCTAGGAGTCACTTTGTGAAAGGGATTGAGCTTTTAATATTGCTCATAGTTTACAGGGCTTATGGTTCAGCAGCAATCGGTGGAGCTTACGCTTTCCTTTCATGGTCAATGTGGTTCTTGGTTTGTTCTTGGCTGTTTGCTCCTTTCCTTTTTAATCCATCTGGATTTGAGTGGCAGAAGATAGTTGAAGACTGGGATGACTGGAAGAAATGGATAAGTAGCCGAGGTGGCATTGGTGTTCCTGGAAATAAAAGCTGGGAATCATGGTGGGATGAGGAACAAGAGCATTTGCAATACACTGGGTTCATGGGAAGGTTTTGGGAGTGTTTCCTAGCCCTGCGTTTCTTTGTCTATCAATATGGCATTGTGTATCAGCTCCATATATCAAGAGGCGACAAGAGCATTGTGGTTTATGGTCTGTCCTGGCTTGTCATAGTAGCTATCATGATCACCTTGAAGATTGTGTCCTTGGGTAGCAAGAAGTTCAGCGCAGACTTCCAATTGATGTTCCGTCTTCTCAAATTCTTCCTATTTGTTGGAACCGTTGTCGCCTTTACCTTAATGTTTGTCTTGCTAGGTCTCACCGTTACTGACATATTTGCCAGCCTCTTAGCCTTTTTTCCAACAGGCTGGGCTCTTGTACAGATAGCACAAGCATGCAGGCCTATTGTGAAGGCCATAAGAATGTGGAGTTCTGTCAAAGCTTTAGCAAAAGGCTACGAATATCTGATGGGAGTTATTATCTTTGCACCTGTTGCTGTATTGGCATGGTTCCCTTTTGTATCAGAATTTCAAACTAGGCTTCTATTCAACCAAGCTTTCAGTAGAGGGCTTCAAATCCAGCGTATTTTATCTGGCGGTAAGAAGAATAAGTAA 5205 0.4209 MQLEEIKAAVSALWNTRGLNWPSTFEQHRQRSGDLDLLDWLRAMFGFQKDNVRNQREHLILLLANSHIRLNPKPEPLNKLDDRAVDEKMNELFKNYKNWCKFLGRKHSLRLPQQGQQEIQQRKLLYMGLYLLIWGEASNLRFMPECLCYIFHNMAYELNGLLAGNVSIVTGENIKPSYGGEDESFLRKVVTPIYRVIENEAQRGKNGTAPHSSWCNYDDLNEYFWSPDCFSLGWPMRDDGDFFKSTFVSQGRHGARKKAGKTGKSNFVESRSFWHIFRSFDRLWTFYIMALQVMIIISWNNTQLNELFQKPLLFKLSSIFITAAILRLLQGILDLVLNFPGYHRWRFTNVLRLLLKIIVSILWVIVLPLLYIGSFENNNNVPEFITKILSFLGDTKGLPQLYLLAVAVYLLPNALTVFLFFFPMLRRWIENSDWRIVRFFMWWAQPRIYVGRGMHESQFSLFRYTFFWLLLLASKVAFSYFIQIKPLVEPTKEIMRIRHVDYAWHEFFPNVTHNYGAVIALWSPVVLVYFMDTQIWYAIFSTLSGGVVGAFDRLGEIRTLTMLRSRFQSLPGAFNAFLVPTDKNQKRRFSLSKRFAEVTPSRRVEAAKFAQLWNEIICSFREEDIISDREMDLLMVPYSLDPSLKIIQWPPFLLASKIAVALDMAAQFHGKDSDLWKRICHDEYMKCAVIECYEAFKNVLNTLVVGDLEKRTISVIFKEVENSISKNTLLTNFRMAFLPNLCKKFVELVEILKDADPSKRGTVVVLLQDILEVFTRDMMVNDISELAELNHSSKDTGRQLFAGTDARPAVYFPPVLTAQWEEQIRRLHLLLTVKESAMEVPTNLEARRRITFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPGSNSLLYTINCLRSVFIDEWNNFMERLDCKKDSEVWEKEENVLQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEREILNGYKAVTVPSEEDKKSKRSLYASIEAVADMKFTYVATCQIYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREAGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPPKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASRVINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDVYRLGHRFDFFRMLSFYFTSIGFYFSSMVVALTVYAFLYGKLYLSLSGLEAAIVKLANRRGDEALRAIMASQSLVQIGLLMTLPMIMEIGLERGFRSAMGEMIIMQLQLAPVFFTFSLGTKLHYYGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYSRSHFVKGIELLILLIVYRAYGSAAIGGAYAFLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWKKWISSRGGIGVPGNKSWESWWDEEQEHLQYTGFMGRFWECFLALRFFVYQYGIVYQLHISRGDKSIVVYGLSWLVIVAIMITLKIVSLGSKKFSADFQLMFRLLKFFLFVGTVVAFTLMFVLLGLTVTDIFASLLAFFPTGWALVQIAQACRPIVKAIRMWSSVKALAKGYEYLMGVIIFAPVAVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILSGGKKNK* 1735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2085 1734 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 1 1733 - -
Amo10g2085 1734 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1733 - -
Amo10g2085 1734 SMART FKS1_dom1_2 121 237 IPR026899 -
Amo10g2085 1734 Coils Coil 1133 1153 - -
Amo10g2085 1734 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 123 234 IPR026899 -
Amo10g2085 1734 Pfam 1,3-beta-glucan synthase component 840 1548 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2085 Amo-Chr10 74673633 74683283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2085 1 1734 Glycosyltransferase AT1G05570 60.882 0.0 2168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2085 K11000 - gmx:100777245 2923.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2085 10 74673633 74683283 Amo20g2575 20 120526922 120536996 hybridization
Amo13g3747 13 126570714 126576074 Amo10g2085 10 74673633 74683283 PCT
Amo03g2842 03 119311698 119316996 Amo10g2085 10 74673633 74683283 PCT