Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2423 ATGTCTTCTGCAAGCAAGGGCGACAGGAAGGCTACCCTTGATGCAGCATCATGGTTGTTCAATGTAGTCACATCTGTAGGAATAATCCTTGTGAATAAAGCATTGATGGCTACTTATGGTTTCAGTTTTGCTACAACTTTGACTGGTCTGCATTTTGTCACAACAACTTTGTTGACTACCATTCTTAAATCACTTGGATATATCCAAAGCGCTCATCTTCAATCATCTGATATCATCAAATTTGTTTTATTTGCAAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATTGCCAAGCTGAGTATGATCCCAGTATCTTGTTTCCTGGAAGTTGTTTTTGACAATGTGAGATATTCAAGAGACACAAAGCTTAGTATTCTTTTGGTTCTGCTTGGTGTTGCTGTTTGTACAGTAACCGATGTCAGCGTCAATGCTAAGGGTTTCATAGCTGCTGTAGTAGGAGTTTGGAGCACAGCACTGCAGCAATATTATGTACATTACCTTCAAAGAAAGTATTCTATTGGATCATTTAACTTGTTGGGCCAGACTGCACCAGCACAGGCAGCTAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTGACAAACAAACGAGTTGATGCCTATGGCTATAGTTTGACATCCATTTTGTTCATCATTTTGTCTTGCTCTATCGCGGTAGGGACAAACCTCAGCCAGTTCATATGCATTGGTAGGTTTACAGCTGTATCATTCCAAGTCCTCGGCCATATGAAGACAATTCTGGTCCTGATCTTAGGATTCATCTTCTTTGGAAAAGAAGGTCTCAATCTACAAGTAATTCTAGGTATGGTCATTGCAATAGCGGGAATGATCTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGGAAGGAGCGCCGTAGCTTTTCCCTTCCTAAAACTCAAGATTATAGTTCACTACCTGTATCCTCTGAACCAGATGAGAAGGTATAG 1002 0.4082 MSSASKGDRKATLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFVTTTLLTTILKSLGYIQSAHLQSSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVFDNVRYSRDTKLSILLVLLGVAVCTVTDVSVNAKGFIAAVVGVWSTALQQYYVHYLQRKYSIGSFNLLGQTAPAQAASLLLVGPFLDYWLTNKRVDAYGYSLTSILFIILSCSIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLILGFIFFGKEGLNLQVILGMVIAIAGMIWYGNASSKPGGKERRSFSLPKTQDYSSLPVSSEPDEKV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2423 333 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
Amo20g2423 333 MobiDBLite consensus disorder prediction 302 333 - -
Amo20g2423 333 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
Amo20g2423 333 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2423 Amo-Chr20 113343410 113349957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2423 18 298 Organic Solute Cotransporters AT1G77610 24.055 3.91e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2423 - - gmx:100794276 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1858 10 66332034 66335873 Amo20g2423 20 113343410 113349957 hybridization
Amo03g2858 03 119785719 119789746 Amo20g2423 20 113343410 113349957 PCT
Amo20g2423 20 113343410 113349957 Amo03g2858 03 119785719 119789746 PCT