Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1858 ATGGGTGAGGGAGAACGATTTCAACTTGGGACTGTCGGCGCGTTGACTCTTTCTGTGGTGTCATCGGTGTCGATTGTGATTTGCAATAAGGCACTGATGAGCTCATTGCATTTCATTTTCGCTACAACTTTGACAAGTTGGCATCTGCTTGTCACATTCTGTTCACTTCATGTGGCACTCAGAATGCGATTCTTTGAGCATAAACCTTTCGAGCAGAAAGCCGTAATGGGATTTGGGATTTTAAATGGAATCTCAATTGGACTCCTAAACTTGAGTTTAGGGTTCAATTCTGTTGGTTTTTATCAGATGACCAAACTGGCAATCATTCCATGTACTGTAATGTTGGAGACCATTTTTCTTGGGAAGAGATTCAGTAAAAGAATTCAGTTTGCCCTAGCTATCCTCCTTCTGGGTGTTGGGATTGCAACTGTCACAGATTTGCAGCTCAATGCTATGGGCTCTTTTTTGTCGTTGCTAGCAGTGATTACAACATGTGTTGCTCAGATTATGACAAATACTATTCAGAAGAAGTTCAAGGTTTCTTCCACCCAACTTCTGTATCAATCATGTCCATACCAAGCAGCAACTCTGTTAGTCTCTGGTCCATTTTTGGATAAATTTTTGACCAACCAAAATGTTTTTGCTTTCAACTATACAACACAAGTGACGGTCTTCATTGTTCTGTCATGCCTCATCTCCATCTCGGTCAATTTTAGTACATTTCTTGTTATCGGAAAGACATCTCCGGTCACCTATCAGGTACTTGGACACCTGAAGACTTGCCTTGTATTGGCATTTGGGTATATTTTACTCCATGACCCATTCAGCTGGAGGAACATACTCGGTATTCTCATCGCCATGGTTGGAATGATTCTATACTCTTATTATTGCACTCTTGAGAATCAACAAAAAGCTGTGGAAACTTCAGTACAAACCTCCCAGGCAAGAGAAGCTGAATCTGATCCTCTTATTAATGTGGAGAATGGAAGTTCAGTTGTGAGTGATTCAGTTGTGCAAATGTCCCCTCTATGGAGCAAAGACAAAGACTAA 1050 0.4105 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALRMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVMLETIFLGKRFSKRIQFALAILLLGVGIATVTDLQLNAMGSFLSLLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLVSGPFLDKFLTNQNVFAFNYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILIAMVGMILYSYYCTLENQQKAVETSVQTSQAREAESDPLINVENGSSVVSDSVVQMSPLWSKDKD* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1858 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
Amo10g1858 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 294 - -
Amo10g1858 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 3 324 - -
Amo10g1858 349 PANTHER SOLUTE CARRIER FAMILY 35 3 324 - -
Amo10g1858 349 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1858 Amo-Chr10 66332034 66335873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1858 1 325 Organic Solute Cotransporters AT1G21870 24.340 3.01e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1858 K15285 - gmx:100786018 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1858 10 66332034 66335873 Amo20g2423 20 113343410 113349957 hybridization
Amo03g2858 03 119785719 119789746 Amo10g1858 10 66332034 66335873 PCT
Amo10g1858 10 66332034 66335873 Amo03g2858 03 119785719 119789746 PCT