Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2858 ATGTCTACAGCAACCAAGGGTGATAGGAAGGCCACCCTTGACGCAGCATCATGGATGTTCAATGTGGTATCATCTGTGGGAATCATCATTGTGAATAAAGCTCTCATGGCTAACTATGGTTTCAGTTTTGCTACGACCTTAACTGGCCTCCATTTTATCACAACCACCTTGCTGACTTCCATTCTTAAGGGGATGGGATATATCCAGAGTACTCAACTTCCAATTTCTGATCTCATCAAGTTTGTTTTATTTGCTAATTTTTCCATTGTCGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATCGCTAAGTTGAGTATGATTCCAGTATCTTGTTTGCTGGAAGTTGTCTTTGATGATGTGCGATATTCAAGGGACACAAAGCTAAGCATTTGTTTGGTACTCCTTGGTGTTGGTGTCTGTACTGTCACTGATGTGAGCGTCAATATGAAGGGCTTAATAGCTGCTGTGGTGGCAGTCTGGAGCACCGCACTTCAGCAGTATTATGTGCATTTTCTACAGAGGAAGTACTCTCTTGGATCGTTTAATTTGTTGGGCCATACTGCACCGGCACAGGCCGCAAGTTTACTGTTAGCAGGTCCCTTTGTGGACTATTGGTTGACAAACAAACGAGTTGATGCTTTCAACTACGGTCTGGCGTCTACTCTGTTCATCGTTCTGTCTTGCACTATCGCGGTAGGAGTAAACCTTAGTCAGTTCATCTGCATTGGCCGGTTTACTGCCGTAACATTCCAAGTCCTTGGCCATATGAAGACTATTCTAGTTCTTATCTTGGGATTTGTTTTCTTTGGAAAAGAAGGCCTCAATCTACATGTAGTTATAGGCATGCTCATTGCCATAGTTGGAATGATCTGGTACGGCAATGCATCTTCACAGCCAGGAGGGAAAGAGCGCCGCAGTCATTCCCTTCCTACCACTACCAAAACACAAGATTATAGTGCAGTTCCAGTATCATCTGAACCTGATGAAGAGGCATAG 1011 0.4352 MSTATKGDRKATLDAASWMFNVVSSVGIIIVNKALMANYGFSFATTLTGLHFITTTLLTSILKGMGYIQSTQLPISDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDDVRYSRDTKLSICLVLLGVGVCTVTDVSVNMKGLIAAVVAVWSTALQQYYVHFLQRKYSLGSFNLLGHTAPAQAASLLLAGPFVDYWLTNKRVDAFNYGLASTLFIVLSCTIAVGVNLSQFICIGRFTAVTFQVLGHMKTILVLILGFVFFGKEGLNLHVVIGMLIAIVGMIWYGNASSQPGGKERRSHSLPTTTKTQDYSAVPVSSEPDEEA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2858 336 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
Amo03g2858 336 PANTHER SOLUTE CARRIER FAMILY 35 7 314 - -
Amo03g2858 336 MobiDBLite consensus disorder prediction 303 336 - -
Amo03g2858 336 MobiDBLite consensus disorder prediction 304 327 - -
Amo03g2858 336 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2858 Amo-Chr3 119785719 119789746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2858 18 321 Organic Solute Cotransporters AT1G77610 23.885 4.63e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2858 - - gmx:100794276 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g2858 03 119785719 119789746 Amo10g1858 10 66332034 66335873 PCT
Amo03g2858 03 119785719 119789746 Amo20g2423 20 113343410 113349957 PCT
Amo10g1858 10 66332034 66335873 Amo03g2858 03 119785719 119789746 PCT
Amo20g2423 20 113343410 113349957 Amo03g2858 03 119785719 119789746 PCT