Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1618 ATGGCTCCAATTGCGCTTYTCAACCCAGCAACAAGTGTCACAACTATAACTGGAAAGGTGAAGAAGCATGTGATGAGGGGAAAGTACTCTTTTGGTGGTGGAAGAAGCTATAGAGTGGGATTGCCACCATTGTTGATCCTTCCAAGTTGGAGGGTCCAAAAAGTTCAATGTTTTGGTAATTGGAGTAGAAATGATTCAAAAGTAATTGGGGATAACAGAGGTTCCATGGTAGTGAAGGCTGCTTCTGAAGGAGGAGCCATCTCTCTACCTAAGCATTGGCCACTTTCAAAGGACCCAGAAGAAAAACTCCAAGACCCAGTTCCCAGAATGAAGGGTTCGAGCCGTTTCTTCACGGTRGGTCTTGTAGCTTCATGGTACTCCTCCAACATTGGCGTTCTCCTTCTCAACAAGTACCTTCTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACAGCATGTTCTTTGTTCAGTTATGTTGCCATAGCGTGGATGAAGGTGGTGCCTTTGCAAACCATACGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTTTGAGCCTTATTTTYTGTGTCTCCGTTGTGTTTGGKAACGTGTCGTTGAGGTACCTTCCTGTGTCGTTTAACCAAGCAATTGGTGCCACAACGCCTTTCTTCACTGCCGTTTTTGCTTACCTAATGACGTTTAAGAGGGAGGCTTGGCTCACATATCTCACACTTGTTCCGGTTGTCACTGGTGTCATCATTGCCAGCGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATTATATGTGTTGCCGCTACAGCTGCAAGAGCCCTGAAATCAGTGCTACAAGGAATTTTGCTTTCTTCCGAAGGAGAGAAGCTCAATTCTATGAATCTTCTCCTTTACATGGCTCCTATGGCGGTGGTTTTCCTTCTTCCCGCTACACTTATAATGGAAGAAAATGTGGTTGGAATCACTTTGGCGCTTGCCAGAGATGATTCCAAGATCATTTGGTACCTGCTATTCAATTCGGCGCTCGCATATTTTGTCAACCTGACCAATTTCTTGGTCACAAAACATACAAGTGCTCTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTATCAATTCTAATATTTAGAAACCCAGTTTCGGTTACTGGAATGATGGGGTACACCCTCACAGTCTTTGGAGTTATCCTTTACAGTGACGCGAAAAAGCGAACCAAATGA 1248 0.4479 MAPIALXNPATSVTTITGKVKKHVMRGKYSFGGGRSYRVGLPPLLILPSWRVQKVQCFGNWSRNDSKVIGDNRGSMVVKAASEGGAISLPKHWPLSKDPEEKLQDPVPRMKGSSRFFTVGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTIRSRVQFFKISALSLIFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTLTVFGVILYSDAKKRTK* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1618 415 PANTHER - 32 414 - -
Amo20g1618 415 PANTHER SOLUTE CARRIER FAMILY 35 32 414 - -
Amo20g1618 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 306 408 - -
Amo20g1618 415 Pfam Triose-phosphate Transporter family 121 408 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1618 Amo-Chr20 44719370 44731494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1618 109 415 Organic Solute Cotransporters AT3G11320 89.577 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1618 - - gmx:100785614 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2624 14 111882981 111886727 Amo20g1618 20 44719370 44731494 ECH
Amo11g0238 11 3514445 3516570 Amo20g1618 20 44719370 44731494 ECH
Amo20g1618 20 44719370 44731494 Amo20g1618 20 44719370 44731494 ECH
Amo20g1618 20 44719370 44731494 Amo10g1127 10 23700134 23702982 hybridization