Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g0238 ATGAAGATTACAGGGAAGGTATTCACGTTTGGTTTGATAGCATTCTGGTATGCTTCAAACATTGGAGTGTTGTTGCTGAACAAGTACCTGTTAAGCAACTATGGATTCAGGTACCCAATCTTTCTCACACTGTGTCACATGATGGCGTGTTCGATCCTCAGCTACGTGGCGATTTCATGGATGAAGATGGTGCCAATGCAAACGATTAGGTCAAGGGTGCAGTTCATGAAGATATCTTCCTTGGGACTCATATTTTGTTTGTCTGTTGTTGGAGGGAACATATCTCTTCGCTACCTTCCTGTTTCCTTCAACCAGGCCGTCGGCGCAACCACGCCGTTCTTTACGGCGGTTTTCGCTTATTTTATGACTCTCCGGCGGGAGGGTTGGGTCACCTATATCACTCTTGTTCCCGTCGTTACCGGTGGAGAGCCAAGTTTTCATCTCTTTGGATTCATAATGTGCATCAGTGCCACAGCGGCAAGGGCACTCAAAACAGTTCTTCAAGGAATCTTGCTGACTTCAGATGGCGAAAAGCTTAATTCGATGAACCTTCTTATGTACATGGCACCGGTGGCTGTGGCGTTCCTTCTTCCAGCTTCAATTATAATGGAGGATGATGTAGTTGGAATTACAATTTCACTTGCCAGAGAAGATCCAAGTATTCTGTGGTTACTTATCTTCAATTCAGCATTGGCATATTTTGTCAATCTGACCAATTTCTTGGTCACAAAGCACACAAGTGCCTTGACACTTCAGGTCCTAGGAAATGCAAAAGGTGCTGTGGCAGTTGTGATCTCCATTTTGATATTCCGAAACCCTGTATCAGTTACTGGAATGCTTGGATATTCTCTAACAGTTTTTGGTGTCATCCTATATAGTGAAGCCAAGAAACGGAGTAAATGA 903 0.4396 MKITGKVFTFGLIAFWYASNIGVLLLNKYLLSNYGFRYPIFLTLCHMMACSILSYVAISWMKMVPMQTIRSRVQFMKISSLGLIFCLSVVGGNISLRYLPVSFNQAVGATTPFFTAVFAYFMTLRREGWVTYITLVPVVTGGEPSFHLFGFIMCISATAARALKTVLQGILLTSDGEKLNSMNLLMYMAPVAVAFLLPASIIMEDDVVGITISLAREDPSILWLLIFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMLGYSLTVFGVILYSEAKKRSK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g0238 300 PANTHER - 6 299 - -
Amo11g0238 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 294 - -
Amo11g0238 300 Pfam Triose-phosphate Transporter family 12 293 IPR004853 -
Amo11g0238 300 PANTHER SOLUTE CARRIER FAMILY 35 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g0238 Amo-Chr11 3514445 3516570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g0238 1 300 Organic Solute Cotransporters AT3G11320 81.494 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g0238 - - gmx:100803533 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0238 11 3514445 3516570 Amo11g0238 11 3514445 3516570 ECH
Amo11g0238 11 3514445 3516570 Amo20g1618 20 44719370 44731494 ECH
Amo14g2624 14 111882981 111886727 Amo11g0238 11 3514445 3516570 ECH