Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1127 CAGATCCAGCACCCAGCAATAAATAACAACAAAGTTCACAACTTTCTATTGAAATCGCAGGACCCAGAAGAAAAACTCCAAGACCCAGTTCCCAGAATGAAGGGTTCGAGCCGTTTCTTCACGGTAGGTCTTGTAGCTTCATGGTACTCCTCCAACATTGGCGTTCTCCTTCTCAACAAGTACCTTCTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACAGCATGTTCTTTGTTCAGTTATGTTGCCATAGCGTGGATGAAGGTGGTGCCTTTGCAAACCATACGATCCAGGGTTCAGTTCTTCAAGATCTCTGCTTTGAGCCTTATTTTCTGTGTCTCCGTTGTGTTTGGTAACGTGTCGTTGAGGTACCTTCCTGTGTCGTTTAACCAAGCAATTGGTGCCACAACGCCTTTCTTCACTGCCGTTTTTGCTTACCTAATGACGTTTAAGAGGGAGGCTTGGCTCACATATCTCACACTTGTTCCGGTTGTCACTGGTGTCATCATTGCCAGCGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATTATATGTGTTGCTGCTACAGCTGCAAGAGCCCTGAAATCAGTGCTACAAGGGATTTTGCTTTCTTCCGAAGGAGAGAAGCTCAATTCTATGAATCTTCTCCTTTACATGGCTCCTATGGCGGTGGTTTTCCTTCTTCCCGCTACACTTATAATGGAAGAAAATGTGGTTGGAATCACTTTGGCGCTTGCCAGAGATGATTCCAAGATCATTTGGTATCTGCTATTCAATTCGGCGCTCGCATATTTTGTCAACCTGACCAATTTCTTGGTCACAAAACATACAAGTGCTCTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTATCAATTCTAATATTTAGAAACCCAGTTTCGGTTACTGGAATGATGGGGTACACCCTCACAGTCTTTGGAGTTATCCTTTACAGTGACGCGAAAAAGCGAACCAAATGA 1017 0.4474 QIQHPAINNNKVHNFLLKSQDPEEKLQDPVPRMKGSSRFFTVGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTIRSRVQFFKISALSLIFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTLTVFGVILYSDAKKRTK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1127 338 PANTHER SOLUTE CARRIER FAMILY 35 13 337 - -
Amo10g1127 338 Pfam Triose-phosphate Transporter family 44 331 IPR004853 -
Amo10g1127 338 PANTHER - 13 337 - -
Amo10g1127 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1127 Amo-Chr10 23700134 23702982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1127 32 338 Organic Solute Cotransporters AT3G11320 89.577 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1127 - - gmx:100785614 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1618 20 44719370 44731494 Amo10g1127 10 23700134 23702982 hybridization