Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1338 ATGGCTTGTGATAATAACAACTTCCCTGATGTGTTTTCTTGGATTCAGAACCTTAAACCAATATCTGAATGGGAAACAGATTCCATGTCCATAACCATATCTTCTTCTTCTTCTTCTTCATTCCAAGAACCATATCTTAAGCTTACAATACCCAAAAACTATAATCATCATAACCAATCCTCACTCTCTTTTGCTATCATTGCAGATTTCAACAACATCCACATCCCTCTTTGGAACTCAAAACCAATGAAACCTAACAACAATAACTTATTATTACTGGATCAAGAAACAATTTCAGATCTCTTCATCAATTTCATTCAGGCAATTCTCCACTATGGATCCAACAAGAACAGCCCTTTCATCAGGTTCCCGAAACTCGATTACATCCCAAACTTCTCCGAAATATTCAACGTCTCCTTCTTCACTCTCTCCTTCCTCGTCTCCATCTACGAAGCGCCGGCGAATCTTCGCTCCGGATCGATCCAGACTCTGAAGGGTTACTTGACAAGCAATCAACAAAGCGAGGCCTCGAATTTGCTCATGAAACTGCTGGGATCAAACTTGGAAGAACAATGGATGCGGTCCGTGAACCTTGGGGTCACGAATTGGATTGGGGAGATGCAAGAAACGGTTAAAGAAAAGATTATGAGGATGCCGTGTTCTTTGTTCTCGCATTGGTTTTCGACGTATGGGTTATGGAAGGTGCAACTGTATTGTCCTGTTATAGTTATGGATATTGAGAGTTCATCAAAGAGTCATTTGCCGAATGAGAAGCTTCAATTCTCTCTCAAGTATCACCAGCTTCAAGGTGTTATTCAGTTCAATTACAGTGTCTCCATCAAGGACAAGTGGGTTGAAATTGTCGCCAACATTGATAACATAAGGTGTGATGTTATGAAATTGGTGAAGAACTCCCTTCTAAGGGAAAGAGGTGCCGGTGCAACTGAAAAACACTTTCCTTCAAGAATCTCTCTACAACTCACACCAACTCTACAAACCCAAGTATTAAGTGTCTCCGTTGGAAAATCCTCAGATAATCCAACAAGAGAAATTGGTACGGAAAAAAACATAGAAGCCTCATTTGACCCACCAAATCCCTTGGGGCTCAAGGTATCCGCCGGCGAATCCATGACCGTTAGTTTAAAGCCATGGAAATTTGAGGAATCCATTTACGGCTACAGCGCCAATTTAAATTGGTTCCTTCACGATAGCATGGATGGTAAGGAGGTTTTTTCGTCCAAGCCTTCGAAATTCGCTCTGATTAACCCTAAGTCATGGTTCAAGAACCGGTACTCTAGAGCTTATAGACCGTTCACTAGGCAAGGAGGTGTTATTTTTGCTGGTGATGAATATGGAGATAAAGTGTTATGGAAAGTGGAGAAAGATGCTATTGGGAAAACTATGGAGTGGGAGATAAGGGGTTGGATTTGGTTAACTTATTGGCCTAACAAGCACAAAACTTTCTACAATGAAACTAGGAGGTTTGAGTTTGGAGAAATAGTCCATCTCCATGTTGCTTAG 1521 0.4116 MACDNNNFPDVFSWIQNLKPISEWETDSMSITISSSSSSSFQEPYLKLTIPKNYNHHNQSSLSFAIIADFNNIHIPLWNSKPMKPNNNNLLLLDQETISDLFINFIQAILHYGSNKNSPFIRFPKLDYIPNFSEIFNVSFFTLSFLVSIYEAPANLRSGSIQTLKGYLTSNQQSEASNLLMKLLGSNLEEQWMRSVNLGVTNWIGEMQETVKEKIMRMPCSLFSHWFSTYGLWKVQLYCPVIVMDIESSSKSHLPNEKLQFSLKYHQLQGVIQFNYSVSIKDKWVEIVANIDNIRCDVMKLVKNSLLRERGAGATEKHFPSRISLQLTPTLQTQVLSVSVGKSSDNPTREIGTEKNIEASFDPPNPLGLKVSAGESMTVSLKPWKFEESIYGYSANLNWFLHDSMDGKEVFSSKPSKFALINPKSWFKNRYSRAYRPFTRQGGVIFAGDEYGDKVLWKVEKDAIGKTMEWEIRGWIWLTYWPNKHKTFYNETRRFEFGEIVHLHVA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1338 506 PANTHER EXPRESSED PROTEIN 6 506 - -
Amo20g1338 506 PANTHER - 6 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1338 Amo-Chr20 28470645 28474373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1338 - - aip:107620363 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1338 20 28470645 28474373 Amo20g1338 20 28470645 28474373 ECH
Amo20g1338 20 28470645 28474373 Amo10g0900 10 14538008 14541393 hybridization
Amo20g1338 20 28470645 28474373 Amo17g0212 17 3051167 3054299 PCT
Amo17g0212 17 3051167 3054299 Amo20g1338 20 28470645 28474373 PCT