Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0900 ATGAAACCTAAACAACATAACTTATTATTACTGGATCAAGAAACAATTTCAGTCTCTTCATCAATTTCATTCAGGCAATTCTCCACTACGGATCCAACAAGAACAGCCCTTTCATCAGGTTCCCCAAACTCGATTACATCCCAAACTTCTCCGAAATATTCAACGTCTCCTTCTTCACTCTCTCCTTCCTCGTTCCATCTACGAAGCGCCGGCGATTTGCTCCGGATCGATCCAGACTCTGAAGGGTTACTTGACAAGCAATCAACAAAGCGAGGCCTCGAATTTGCTCATGAAACTGCTGGGATCAAACTTGGAAGAACAATGGATGCGGTCCGTGAACCTTGGGGTCACGAATTGGATTGGGAGATGCAAGAAACGGTTAAAGAAAAGATTATGAGGATGCCGTGTTCTTTGTTCTCGCATTGGTTTTCGACGTATGGGCTATGGAAGGTGCAACTGTATTGTCCTAGTCATTTGCCGAATGAGAAGCTTCAATTCTCTCTCAAGTATCACCAGCTTCAAGGTGTTATTCAGTTCAATTACAGTGTCTCCATCAAGGACAAGTGGGTTGAAATTGTCGCCAACATTGATAACATAAGAATCTCTCTACAACTCACACCAACTCTACAAACCCAAGTATTAAGTGTCTCTGTTGGAAAATCCTCAGATAATCCAACAAGAGAAATTGGTACGGAAAAAAACATAGAAGCCTCATTTGACCCACCAAATCCCTTGGGGCTCAAGGTATCCGCCGGCGAATCCATGACCGTTAGTTTAAAGCCATGGAAATTCGAGGAATCCATTTACGGCTATAGCGCCAATTTAAATTGGTTCCTTCACGATAGCATGGATGGTAAGGAGGTTTTTTCGTCCAAGCCTTCCAAATTGGCTCTGATTAACCCTAAGTCATGGTTCAAGAACCGGTACTCTAGAGCTTATAGACCGTTCACTAGGCAAGGAGGTGTTATTTTTGCTGGTGATGAATATGGAGATAAAGTGTTATGGAAAGTGGAGAAAGATGCTATTGGGAAAACTATGGAGTGGGAGATAAGGGGTTGGATTTGGTTAACTTATTGGCCTAACAAGCACAAAACTTTCTACAATGAAACTAGGAGGTTTGAGTTTGGAGAAATAGTCCATCTCCATGTTGCTTAG 1155 0.4242 MKPKQHNLLLLDQETISVSSSISFRQFSTTDPTRTALSSGSPNSITSQTSPKYSTSPSSLSPSSFHLRSAGDLLRIDPDSEGLLDKQSTKRGLEFAHETAGIKLGRTMDAVREPWGHELDWEMQETVKEKIMRMPCSLFSHWFSTYGLWKVQLYCPSHLPNEKLQFSLKYHQLQGVIQFNYSVSIKDKWVEIVANIDNIRISLQLTPTLQTQVLSVSVGKSSDNPTREIGTEKNIEASFDPPNPLGLKVSAGESMTVSLKPWKFEESIYGYSANLNWFLHDSMDGKEVFSSKPSKLALINPKSWFKNRYSRAYRPFTRQGGVIFAGDEYGDKVLWKVEKDAIGKTMEWEIRGWIWLTYWPNKHKTFYNETRRFEFGEIVHLHVA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0900 384 PANTHER EXPRESSED PROTEIN 127 201 - -
Amo10g0900 384 PANTHER EXPRESSED PROTEIN 200 384 - -
Amo10g0900 384 MobiDBLite consensus disorder prediction 29 64 - -
Amo10g0900 384 PANTHER - 127 201 - -
Amo10g0900 384 PANTHER - 200 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0900 Amo-Chr10 14538008 14541393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0900 - - aip:107620363 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1338 20 28470645 28474373 Amo10g0900 10 14538008 14541393 hybridization
Amo10g0900 10 14538008 14541393 Amo17g0212 17 3051167 3054299 PCT
Amo17g0212 17 3051167 3054299 Amo10g0900 10 14538008 14541393 PCT