Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0212 ATGGCTTATTGCAAATTCCCTGATGTTTATTGCTGGATTCAAAAGCTTCCACCAATCTCAGAATGGAGAACAATTTCCATGTCACTAACCATATGTTCTTCATCAAAATCATCACAACCTTCTCTCTCTCTCACCATAGCCAAAAATCACCAAACCCCAAATAAAGTAATCTTTGCAATTGTAGCTGATTTTAGCATCCCCATCTCTCTATGGACCTCAAAACCCTTCAAACCAAATCCAAAAACCATGAGGCTCATAGATAGTGAAGAAACCATTTCCAATCTCCTTGTTAATTTCATTGAAGATATCCTTCACTATGGCCCCAACAAAAACACCAACACCTCCTACATAAAATTCCCATATTCAAATCCAAATAATATTCCAAACTTTGAAGAAATCTTCAACCTTGCATTCCTCACTTTGTTGTTCCTAGTTTGCATATATGAAGCACCTTTGGATATTAGATCCACATGTCTTACTACTTTGAAGAACAACTTACAAGGTTGTCAATCAAGACAAGCATCCAAGTTGTTGATGAAGATGTTGGGGAACAATCTAGAAGAACAATGGATGCGTTCTATAAACCTTGCAATAACTAATTGGATTGTGGAGACTCAACAACATGAACCACATCTTAATCATCATCATCAACATAGCATGATGAGAACACCATCTCCTTTGTACTCTTATTCATTCTCAACTCTTGGGTTATGGAAAGTTCAATTGTATTGCCCTGTTATAAGCATGGATGTTGTGCATTCAAATCACCATCATTATTTAGCAGCTGATGAGAGGCTTCAATTCTCTCTTAAGTATCATCAACTTGAAGGTGTTCTTCAGTTCAATCACAGAGTCTTGAACAGAGAAAGGTGGATTGACATCATCGTCAACATTGACAACATAAGGTGTGATGTATTGAAACTAGTAGATGATAGCCTTTTGAGAGAAAGAGGAGCAGGAGCATCTGAAAAATATTTCCCATCAAGAATATTGTTACAACTAACTCCCATGGTCCAACACCAAGTATTGAGTTTATCGGTTGGCAAGTCCTCAGAAAATCCATCAATAGAGATTGGCATGGAAAGAGGCATAGAAGCCTCATTCCAGCCACCAAATCCCCAAGTAGGGCTCACTTTTTCGGCCGGCGAGTCGTCGACCGTGAGCCTAAAGCCTTGGAAATTCGAGCAATCCGTGTACGGCTATAGCGCGAATTTGAATTGGATCCTCCATGATAGTGTTGATGGTAGGGAAGTGTTCTCATCAAAGCCTTCAAAGATTGCATTGGTGAATCCAAAGTCATGGTTTAAAGATAGATACTCTAGTGCTTATAGACCTTTTACTAGGCAAGGAGGGGTTATTTTTGCTGGGGATGAGTATGGAGAAAGTGTGTGTTGGAAAGTTGATAAAGGTGCTAAGGGCAAAACAATGGAGTGGGAGATTAGGGGTTGGATTTGGGTGACATATTGGCCTAACAAGTATAAGACATTCTATGATGAAACTAGGAGGTTGGAGTTTAGGGAGATACTTCATGTTAACATTCCTTAG 1545 0.3922 MAYCKFPDVYCWIQKLPPISEWRTISMSLTICSSSKSSQPSLSLTIAKNHQTPNKVIFAIVADFSIPISLWTSKPFKPNPKTMRLIDSEETISNLLVNFIEDILHYGPNKNTNTSYIKFPYSNPNNIPNFEEIFNLAFLTLLFLVCIYEAPLDIRSTCLTTLKNNLQGCQSRQASKLLMKMLGNNLEEQWMRSINLAITNWIVETQQHEPHLNHHHQHSMMRTPSPLYSYSFSTLGLWKVQLYCPVISMDVVHSNHHHYLAADERLQFSLKYHQLEGVLQFNHRVLNRERWIDIIVNIDNIRCDVLKLVDDSLLRERGAGASEKYFPSRILLQLTPMVQHQVLSLSVGKSSENPSIEIGMERGIEASFQPPNPQVGLTFSAGESSTVSLKPWKFEQSVYGYSANLNWILHDSVDGREVFSSKPSKIALVNPKSWFKDRYSSAYRPFTRQGGVIFAGDEYGESVCWKVDKGAKGKTMEWEIRGWIWVTYWPNKYKTFYDETRRLEFREILHVNIP* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0212 514 PANTHER NEURONAL PAS DOMAIN PROTEIN 1 513 - -
Amo17g0212 514 PANTHER EXPRESSED PROTEIN 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0212 Amo-Chr17 3051167 3054299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0212 - - adu:107496928 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0212 17 3051167 3054299 Amo17g0212 17 3051167 3054299 ECH
Amo20g1338 20 28470645 28474373 Amo17g0212 17 3051167 3054299 PCT
Amo10g0900 10 14538008 14541393 Amo17g0212 17 3051167 3054299 PCT
Amo17g0212 17 3051167 3054299 Amo20g1338 20 28470645 28474373 PCT
Amo17g0212 17 3051167 3054299 Amo10g0900 10 14538008 14541393 PCT