Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g2377 ATGTCTCAACCTCAAAGTGATCCCCTTTTGCAAGCTGAAACAACTTGTGGGTCCCTCTTGTATGAACTTCAGATAATATGGGATGAAGTCGGGGAGAATGAGACTGAGAGAGATAGAATGCTTTTTGAGCTTGAACAAGAGTGCCTAGAAGTATATAGAAGGAAGGTTGATCATGCCAATCGTAATAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCGGAACTTGCGGCCATTTGTTCAGCAATGGGGGAGCGACCAGTCCATACTAGGCAGTCTGATCAAAATGCTGGAAGTTTAAAGGAAGAGCATGCAAGAATTCTGCCACAGTTGGAGGAGATGCGTAAAAGGAAGTCTGAGCGTAGAAATCAATTTATAGAAGTTCACGAGCAAATTCAAGTTATCTCAATGGAGATTTATGGACCAAGAGAATATATTCCAGCTGTTGTAGATGAAATTGATTTGTCCTTGAGAAAACTTGAAGATCTGCACAAACAGCTGCAGGCACTTCAGATTGAAAAGAGTAGTCGCCTCAAAAAGGTCCAGGAGCACCTGTATACGTTGAACTCTCTATGCTCAGTGCTTGGTCTAGACTTTAAGCAGATAATCAATGAAATCCATCCCAGCTTAGGCGAATCAGAAGGATCTAACAGTGTAAGTAATGATACCATCCAACGATTGGCTGTTGCTATACAAGAACTACGCGAAGTAAAATTGCAGAGAATGCAGAAGCTCCAAGATCTTGCAACATCAATGTTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAACATAGCTGCTTCAGAACATGAAATAACTGAAACTAACACCTTGTCTGTGGACTTCATCAAATGTGTTGAAGCAGAAGTATCAAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAGAGAACAGAACTAGAGGAGATATGTCGAAAGACTCATCTGGTTCCAGAAATAGATAGTGCTGTTGAATATGCTGTTGAAGCTATAGAGTCCGGAACTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAAGTTCAGATTGCTCAAGTTAAAGAGGAAGCTTTAAGCCGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGGAGCCTGTGATGAGGAGTCTTGGCTTGAGGAATACAACAGGGATGACAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCACGTGCCTTGGTTAATAAAATCCCAGCAATGGTAGATGCATTGACTTCAAAAACTTTAGCATGGGAAAAGGAAAAAGGCATTCAGTTCACCTATGATGGTATTTGCCTGCTCTCCATGCTGGAAGAGTACAACATATTACGGGAAAAGAAAGAGCAAGAACGCCGCAAGCAGCGGGATCTGAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCGAGCCCTTCGAAGCCCCAGAGTGTAAAAAAGGGACCTAGGATGTCAACTGGTGGGGCAGCTAGTCGAAGAGTTTCCCTCGGAGGAGCAATGATTCAAACTCCAAAACCTGATTCAAAAGCTAATTCTCGTGTTGCAAGAAAGACTGATAAAGCACACCAAGTTGAGCAGAATTACTTGGATGATGGTGTTTCATGTTTATCATCAGCTAGAAGAGGACTAGATATTGCTGGTGTTCCTGTAAAAAAGTATTCATTTGGTGCCGGGAGCACTCGTGACATAGAACCACCACCTCTTGCTCGACAGCCTTTTTCGCCTATCACTTCGAAAGTATCATCAAATACCAATATGGCAAATTCCAAGGATGAATTGAATATACAGAGTGAGAAGTTGCAGAAAACAATTTCACTTAACAATATGCCATTCTCTACTCCCTCAAAGACAGCTGCTATTGTGGTGGATGATGAGAATAGAACACCAAAGGCAATGCCAATTCCTGTCCCTTCTACACCTTCCACTGTTTCAGTTCCAATGAAGATGGTCATGACTCCAGCTCCTGCTTTTGGAGGTGGTGAATTGGTCCGTGACATTGAATATTCCTTTGAAGAAAGACGTCTTGGTTTTGTCTTACAATGA 2136 0.4209 MSQPQSDPLLQAETTCGSLLYELQIIWDEVGENETERDRMLFELEQECLEVYRRKVDHANRNRAQLRQAIADCEAELAAICSAMGERPVHTRQSDQNAGSLKEEHARILPQLEEMRKRKSERRNQFIEVHEQIQVISMEIYGPREYIPAVVDEIDLSLRKLEDLHKQLQALQIEKSSRLKKVQEHLYTLNSLCSVLGLDFKQIINEIHPSLGESEGSNSVSNDTIQRLAVAIQELREVKLQRMQKLQDLATSMLELWNLMDTPIEEQQMFQNVTCNIAASEHEITETNTLSVDFIKCVEAEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPEIDSAVEYAVEAIESGTVDPACVLEQIEVQIAQVKEEALSRKEILEKVEKWLGACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKTLAWEKEKGIQFTYDGICLLSMLEEYNILREKKEQERRKQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMIQTPKPDSKANSRVARKTDKAHQVEQNYLDDGVSCLSSARRGLDIAGVPVKKYSFGAGSTRDIEPPPLARQPFSPITSKVSSNTNMANSKDELNIQSEKLQKTISLNNMPFSTPSKTAAIVVDDENRTPKAMPIPVPSTPSTVSVPMKMVMTPAPAFGGGELVRDIEYSFEERRLGFVLQ* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g2377 711 MobiDBLite consensus disorder prediction 605 620 - -
Amo19g2377 711 Coils Coil 151 174 - -
Amo19g2377 711 Coils Coil 295 315 - -
Amo19g2377 711 Gene3D - 365 499 - -
Amo19g2377 711 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 636 - -
Amo19g2377 711 MobiDBLite consensus disorder prediction 493 552 - -
Amo19g2377 711 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 636 IPR007145 GO:0000226|GO:0008017
Amo19g2377 711 Coils Coil 458 488 - -
Amo19g2377 711 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Amo19g2377 711 Coils Coil 49 76 - -
Amo19g2377 711 MobiDBLite consensus disorder prediction 592 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g2377 Amo-Chr19 109271945 109276978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g2377 11 539 EF-hand Containing Proteins AT5G62250 57.885 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g2377 K16732 - gmx:100777734 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2377 19 109271945 109276978 Amo19g2377 19 109271945 109276978 ECH
Amo19g2377 19 109271945 109276978 Amo09g1968 09 82847013 82850780 hybridization
Amo05g3181 05 93334356 93338402 Amo19g2377 19 109271945 109276978 PCT
Amo19g2377 19 109271945 109276978 Amo05g3181 05 93334356 93338402 PCT