Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3181 ATGTCTGAACCTCGAAAAGATTCCCTTATTCATGAGCTTCAGATAATATGGGATGAAGTTGGGGAGTCCGAGACTGACAAGGATAGGATGTTGTTTGAGATTGAAGAAGAGTGTATAGAACTATACAGAAGAAAGGTAGATCAAGCAAATTGGTCCAGAGTTCAACTAAGGCAGGAAATCGCTGACTGCGAGGCAGAGCTTGCAACTATCTGTTCAGCATTGGCAGAGAGACCGATTCACATTAGGCAGGATCAAAATGTTGGAAGCTTGAAACAAGAGCTAGCAAGAATTTACCCAGAGCTGGAGGAAATGCGGAAAAGGAAGTCTGATCGTAGAAATCAACTTATAGATGTTCGTGAGCAGATTCAAAGTATCTCAAATGAGTTGTATAGTCCTGGAGAGCACGCTCCACCCGTTATAGATGAAAATGATTTATCATTGAGAAAGCTTGAAGAATTGCATAGGCAGCTTTATGCACTACAAAAGGAGAAGAGCGATCGCCTGAAGACAGTCCAGGACCACTTGCGTACCTTAAGTTCTCTTTGTTCGGTACTCGGTTTGGACTTCAAGGAGACAATAGACAGAGTTCATCCTAGTTTAGGAAATTCAGAGGGATATAAGAGTATAGATAATGATACTATCAAGCAATTGACTGTTGCTATACAAGATCTGCGAGAAATTAAATTACAGAGAATGGAGAAGCTGCAAGATATTGCAACAACAATGTTGGAACTTTGGCATTTGATGGATACGCCTGTTGAAGAGCAACAGATGTTCCAAAATGTTACTTGTAATATAGCTGCTTCAGAAGATGAAATAACCGAACCGAACACTTTGTCCGAGGGCTTCATCAGTCACGTTGAGGAAGAAGTGTTAAGGTTAGAAGCGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAAAGAGCAGAGCTAGAGGAGATTTGTCAGAAGACTCATTTGGTTCCAGAACTTGARAGTGCACTGGAATATGCTATTGAAACTATTGAATCTGGAACTGTGGACCCTGCTTGGGTTCTTGAACAACTTGAACTTCATATTGCCAAAGTCAAAGAGGAAGCATTTAGCAGAAAAGATATACTTGAAAAGGTTGAGAAATGGTTATCAGCATGTGAAGAAGAGTCTTGGCTTGAGGAATACAACAAGGATGAAAATCGATATAATGCTGGTAGAGGGACTCATCTTAATCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTACCAAAATTCCAGGAATGGTAGAGGCATTGAATTCAAAAACTACAGAATGGGAACAAGAGAGAGGCATTGAGTTCAAATATGATGATGCCCGTCTGCTCTCRATGCTTGAAGATTACACCAACTCGCGGCAAGAAAAAGAGCAAGAYCGTCGTAAGCTGCGGAACCTGAAGAAACATCAGGGACAATTGATAGCAGAACAGGAAGTACTATATGGGTCAAAACCAAGCCCAAAGGCTAATAGTGCAAAAAAGCTTTCAAGGCAGTCAAGTACAACTGGATCTGGTAGAAGAACCTCCCTTGGTGCAAGTTCAAAACTGGAAGCGAAAGCTACTCACTCATATTTCTCATCAGCTAAAACAGGAGTTGATATTGCTCATTCTCCTTTGGAAAAAAACTTATTTGGTAGTGGAAGTGTTCGCAAGATAGATTCTCCTTCAGRGAGACAACCTTTTTCACCCATCTCTTCGACAGAATCATCAAAAGCAAACTCAGCAAATACCACAGATGAACTAAAAATGCAGCAGACTGAGGAGTTGGTGAAAACATTAACACTTTACAATATGCCATTCACTAGTCCCTCAAAGACATCAACAGTGGTAGATGAAGAGAATAAAACCCCAAAAGCAATGCCATTTTCTCRCTTCTCTTCAACATTACCACCAAATTCCTCAAATGAATCAGATATACAGACTCAGAATTTACAGAAAACAATAACACTACACAATTTGCCATTCTCTACTCCTTCAAAGACAGCAACAGAAACAGTGGTAGATGAAGGGTATAYCACTCCAAAGGSAATGGCTATTCCTGRTCCAACTAKACCTTCATCAGTTCCTTTTGGAGGATACTCGGCTCAAGAAACTGAATATTCCTTTGAGGAAAGAAGGCTTGGTTGTGTGTTTGAATGA 2154 0.4025 MSEPRKDSLIHELQIIWDEVGESETDKDRMLFEIEEECIELYRRKVDQANWSRVQLRQEIADCEAELATICSALAERPIHIRQDQNVGSLKQELARIYPELEEMRKRKSDRRNQLIDVREQIQSISNELYSPGEHAPPVIDENDLSLRKLEELHRQLYALQKEKSDRLKTVQDHLRTLSSLCSVLGLDFKETIDRVHPSLGNSEGYKSIDNDTIKQLTVAIQDLREIKLQRMEKLQDIATTMLELWHLMDTPVEEQQMFQNVTCNIAASEDEITEPNTLSEGFISHVEEEVLRLEALKSSKMKELVLKKRAELEEICQKTHLVPELESALEYAIETIESGTVDPAWVLEQLELHIAKVKEEAFSRKDILEKVEKWLSACEEESWLEEYNKDENRYNAGRGTHLNLKRAEKARALVTKIPGMVEALNSKTTEWEQERGIEFKYDDARLLSMLEDYTNSRQEKEQDRRKLRNLKKHQGQLIAEQEVLYGSKPSPKANSAKKLSRQSSTTGSGRRTSLGASSKLEAKATHSYFSSAKTGVDIAHSPLEKNLFGSGSVRKIDSPSXRQPFSPISSTESSKANSANTTDELKMQQTEELVKTLTLYNMPFTSPSKTSTVVDEENKTPKAMPFSXFSSTLPPNSSNESDIQTQNLQKTITLHNLPFSTPSKTATETVVDEGYXTPKXMAIPXPTXPSSVPFGGYSAQETEYSFEERRLGCVFE* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3181 717 MobiDBLite consensus disorder prediction 482 520 - -
Amo05g3181 717 MobiDBLite consensus disorder prediction 494 520 - -
Amo05g3181 717 Gene3D - 354 488 - -
Amo05g3181 717 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 529 595 IPR007145 GO:0000226|GO:0008017
Amo05g3181 717 Coils Coil 451 474 - -
Amo05g3181 717 MobiDBLite consensus disorder prediction 549 588 - -
Amo05g3181 717 MobiDBLite consensus disorder prediction 609 643 - -
Amo05g3181 717 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 529 595 - -
Amo05g3181 717 Coils Coil 39 66 - -
Amo05g3181 717 MobiDBLite consensus disorder prediction 557 588 - -
Amo05g3181 717 MobiDBLite consensus disorder prediction 625 643 - -
Amo05g3181 717 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 520 - -
Amo05g3181 717 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 520 IPR007145 GO:0000226|GO:0008017
Amo05g3181 717 Coils Coil 101 121 - -
Amo05g3181 717 Pfam Microtubule associated protein (MAP65/ASE1 family) 9 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3181 Amo-Chr5 93334356 93338402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3181 8 499 EF-hand Containing Proteins AT5G62250 57.058 2.44e-174 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3181 K16732 - gmx:100777734 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g3181 05 93334356 93338402 Amo19g2377 19 109271945 109276978 PCT
Amo05g3181 05 93334356 93338402 Amo09g1968 09 82847013 82850780 PCT
Amo19g2377 19 109271945 109276978 Amo05g3181 05 93334356 93338402 PCT
Amo09g1968 09 82847013 82850780 Amo05g3181 05 93334356 93338402 PCT