Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1968 ATGTCTCAACCTCAAAGTGATCCCCTTTTGCAAGCTGAAACAACTTGTGGGTCCCTCTTGTATGAACTTCAGATAATATGGGATGAAGTCGGGGAGAATGAGACTGAGAGAGATAGAATGCTTTTTGAGCTTGAACAAGAGTGCCTAGAAGTATATAGAAGGAAGGTTGATCATGCCAATCGTAATAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCAGAGCTTGCAGCCATCTGTTCAGCAATGGGGGAGCGACCAGTCCATACTAGGCAGTCTGATCAAAATGCTGGAAGTTTAAAGGAAGAGCATGCAAGAATTCTGCCACAGTTGGAGGAGATGCGTAAAAGGAAGTCTGAGCGTAGAAATCAATTTATAGAAGTTCACGAGCAAATTCAAGTTATCTCAATGGAGATTTATGGACCAAGAGAATATATTCCAGCTGTTGTAGATGAAATTGATTTGTCCTTGAGAAAACTTGAAGATCTGCACAAACAGCTGCAGGCACTTCAGATTGAAAAGAGTAGTCGCCTCAAAAAGGTCCAGGAGCACCTGTATACGTTGAACTCTCTATGCTCAGTGCTTGGTCTAGACTTTAAGCAGATAATCAATGAAATCCATCCCAGCTTAGGCGAATCAGAAGGATCTAACAGTGTAAGTAATGATACCATCCAACGATTGGCTGTTGCTATACAAGAACTACGCGAAGTAAAATTGCAGAGAATGCAGAAGCTCCAAGATCTTGCAACATCAATGTTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAACATAGCTGCTTCAGAACATGAAATAACTGAAACTAACACCTTGTCTGTGGACTTCATCAAATGTGTTGAAGCAGAAGTATCAAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAGAGAACAGAACTAGAGGAGATATGTCGAAAGACTCATCTGGTTCCAGAAATAGATAGTGCTGTTGAATATGCTGTTGAAGCTATAGAGTCCGGAACTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAAGTTCAGATTGCTCAAGTTAAAGAGGAAGCTTTAAGCCGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGGAGCCTGTGATGAGGAGTCTTGGCTTGAGGAATACAACAGGGATGACAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCACGTGCCTTGGTTAATAAAATCCCAGCAATGGTAGATGCATTGACTTCAAAAACTTTAGCATGGGAAAAGGAAAAAGGCATTCAGTTCACCTATGATGGTATTTGCCTGCTCTCCATGCTGGAAGAGTACAACATATTACGGGAAAAGAAAGAGCAAGAACGCCGCAAGCAGCGGGATCTGAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCGAGCCCTTCGAAGCCCCAGAGTGTAAAAAAGGGACCTAGGATGTCAACTGGTGGGGCAGCTAGTCGAAGAGTTTCCCTCGGAGGAGCAATGATTCAAACTCCAAAACCTGATTCAAAAGCTAATTCTCGTGTTGCAAGAAAGACTGATAAAGCACACCAAGTTGAGCAGAATTACTTGGATGATGGTGTTTCATGTTTATCATCAGCTAGAAGAGGACTAGATATTGCTGGTGTTCCTGTAAAAAAGTATTCATTTGGTGCCGGGAGCACTCGTGACATAGAACCACCACCTCTTGCTCGACAGCCTTTTTCGCCTATCACTTCGAAAGTATCATCAAATACCAATATGGCAAATTCCAAGGATGAATTGAATATACAGAGTGAGAAGTTGCAGAAAACAATTTCACTTAACAATATGCCATTCTCTACTCCCTCAAAGACAGCTGCTATTGTGGTGGATGATGAGAATAGAACACCAAAGGCAATGCCAATTCCTGTCCCTTCTACACCTTCCACTGTTTCAGTTCCAATGAAGATGGTCATGACTCCAGCTCCTGCTTTTGGAGGTGGTGAATTGGTCCGTGACATTGAATATTCCTTTGAAGAAAGACGTCTTGGTTTTGTCTTACAATGA 2136 0.4209 MSQPQSDPLLQAETTCGSLLYELQIIWDEVGENETERDRMLFELEQECLEVYRRKVDHANRNRAQLRQAIADCEAELAAICSAMGERPVHTRQSDQNAGSLKEEHARILPQLEEMRKRKSERRNQFIEVHEQIQVISMEIYGPREYIPAVVDEIDLSLRKLEDLHKQLQALQIEKSSRLKKVQEHLYTLNSLCSVLGLDFKQIINEIHPSLGESEGSNSVSNDTIQRLAVAIQELREVKLQRMQKLQDLATSMLELWNLMDTPIEEQQMFQNVTCNIAASEHEITETNTLSVDFIKCVEAEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPEIDSAVEYAVEAIESGTVDPACVLEQIEVQIAQVKEEALSRKEILEKVEKWLGACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKTLAWEKEKGIQFTYDGICLLSMLEEYNILREKKEQERRKQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMIQTPKPDSKANSRVARKTDKAHQVEQNYLDDGVSCLSSARRGLDIAGVPVKKYSFGAGSTRDIEPPPLARQPFSPITSKVSSNTNMANSKDELNIQSEKLQKTISLNNMPFSTPSKTAAIVVDDENRTPKAMPIPVPSTPSTVSVPMKMVMTPAPAFGGGELVRDIEYSFEERRLGFVLQ* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1968 711 MobiDBLite consensus disorder prediction 605 620 - -
Amo09g1968 711 Coils Coil 151 174 - -
Amo09g1968 711 Coils Coil 295 315 - -
Amo09g1968 711 Gene3D - 365 499 - -
Amo09g1968 711 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 636 - -
Amo09g1968 711 MobiDBLite consensus disorder prediction 493 552 - -
Amo09g1968 711 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 636 IPR007145 GO:0000226|GO:0008017
Amo09g1968 711 Coils Coil 458 488 - -
Amo09g1968 711 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Amo09g1968 711 Coils Coil 49 76 - -
Amo09g1968 711 MobiDBLite consensus disorder prediction 592 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1968 Amo-Chr9 82847013 82850780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g1968 11 539 EF-hand Containing Proteins AT5G62250 57.885 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1968 K16732 - gmx:100777734 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2377 19 109271945 109276978 Amo09g1968 09 82847013 82850780 hybridization
Amo05g3181 05 93334356 93338402 Amo09g1968 09 82847013 82850780 PCT
Amo09g1968 09 82847013 82850780 Amo05g3181 05 93334356 93338402 PCT