Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo19g2367 | ATGGCTTGTTGGTCTGCAGAAAATGCCACTAAGGCCTATCTCAGCACTTTAAAAATGGGTCAAAAGGCGAAGGAACCAGACGTGGCTGAGTTCATATCAGCACTAGCAGCAGGAAACAACGCACAAACAATGGTCGTTGCCTGCGCCGGCGCAGCCGGATCCACCGCACTAGCCTTGGTGGCCGCTGCAAACCAAACCGGCGGCCAAGTTATCTGCATTGTAAACAGCCATCAAAATCTAAAAGCCTCCAAAACCGCATTGGGTACCGCGGCACAACGAGTCGAATTCATGGTTGGAGAAGCACAAGAACTAATGGTAAACCACACTTTTGATTCAGCTGATTTTCTGCTAATAGATTGCAACCTTGATAGCCACGAAGAAATCCTCAAGAAAGTGCATGGAAATAATAACAATGGAACAGTAGTTGTTGTTGGATACAATGCATTTAGTTGCAACGGGTCTTCTTGGTTTGGTTCAAGGACTACTCAATTGCTTCCAATTGGTGAAGGACTTTTGGTAACTAAATTTGGAATTGGATCCAATGTGATTAATAGTCCTAAGTATGGTGGAGGAAACAGAGTAATGAGCAGGGCTAACAGTAACAAGAGCCGTTGGGTTGTTAAGGTTGATAAATGCACAGGGGAGGAACATGTTTTCAGGGTCAGATTTCCACCACAAGGAAAAGTCATTCATGCTTAA | 699 | 0.4464 | MACWSAENATKAYLSTLKMGQKAKEPDVAEFISALAAGNNAQTMVVACAGAAGSTALALVAAANQTGGQVICIVNSHQNLKASKTALGTAAQRVEFMVGEAQELMVNHTFDSADFLLIDCNLDSHEEILKKVHGNNNNGTVVVVGYNAFSCNGSSWFGSRTTQLLPIGEGLLVTKFGIGSNVINSPKYGGGNRVMSRANSNKSRWVVKVDKCTGEEHVFRVRFPPQGKVIHA* | 233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo19g2367 | 232 | Gene3D | Vaccinia Virus protein VP39 | 5 | 175 | IPR029063 | - | |
| Amo19g2367 | 232 | Pfam | Protein of unknown function (DUF1442) | 3 | 220 | IPR009902 | - | |
| Amo19g2367 | 232 | PANTHER | BNAA09G06020D PROTEIN | 1 | 228 | - | - | |
| Amo19g2367 | 232 | PANTHER | DUF1442 FAMILY PROTEIN | 1 | 228 | IPR009902 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo19g2367 | Amo-Chr19 | 108404363 | 108405207 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo19g2367 | - | - | adu:107466072 | 438.728 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo19g2367 | 19 | 108404363 | 108405207 | Amo19g2367 | 19 | 108404363 | 108405207 | ECH | |
| Amo19g2367 | 19 | 108404363 | 108405207 | Amo09g1956 | 09 | 82226842 | 82228066 | hybridization | |
| Amo05g3171 | 05 | 93179085 | 93180008 | Amo19g2367 | 19 | 108404363 | 108405207 | PCT | |
| Amo19g2367 | 19 | 108404363 | 108405207 | Amo05g3171 | 05 | 93179085 | 93180008 | PCT |