Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g1956 ATGGCTTGTTGGTCTGCAGAAAATGCCACTAAGGCCTATCTCAGCACTTTAAAAATGGGTCAAAAGGCGAAGGAACCAGACGTGGCTGAGTTCATATCAGCACTAGCAGCAGGAAACAACGCACAAACAATGGTCGTTGCCTGCGCCGGCGCAGCCGGATCCACCGCACTAGCCTTGGTGGCCGCTGCAAACCAAACCGGCGGCCAAGTTATCTGCATTGTAAACAGCCATCAAAATCTAAAAGCCTCCAAAACCGCATTGGGTACCGCGGCACAACGAGTCGAATTCATGGTTGGAGAAGCACAAGAACTAATGGTAAACCACACTTTTGATTCAGCTGATTTTCTGCTTATAGATTGCAACCTTGATAGCCACGAAGAAATCCTCAAGAAAGTGCATGGAAATAATAACAATGGAACAGTAGTTGTTGTTGGATACAATGCATTTAGTTGCAACGGGTCTTCTTGGTTTGGTTCAAGGACTACTCAATTGCTTCCAATTGGTGAAGGACTTTTGGTAACTAAATTTGGAATTGGATCCAATGTGATTAATAGTCCTAAGTATGGTGGAGGAAACAGAGTAATGAGCAGGGCTAACAGTAACAAGAGCCGTTGGGTTGTTAAGGTTGATAAATGCACAGGGGAGGAACATGTTTTCAGGGTCAGATTTCCACCACAAGGAAAAGTCATTCATGCTTAA 699 0.4464 MACWSAENATKAYLSTLKMGQKAKEPDVAEFISALAAGNNAQTMVVACAGAAGSTALALVAAANQTGGQVICIVNSHQNLKASKTALGTAAQRVEFMVGEAQELMVNHTFDSADFLLIDCNLDSHEEILKKVHGNNNNGTVVVVGYNAFSCNGSSWFGSRTTQLLPIGEGLLVTKFGIGSNVINSPKYGGGNRVMSRANSNKSRWVVKVDKCTGEEHVFRVRFPPQGKVIHA* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g1956 232 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Amo09g1956 232 Pfam Protein of unknown function (DUF1442) 3 220 IPR009902 -
Amo09g1956 232 PANTHER BNAA09G06020D PROTEIN 1 228 - -
Amo09g1956 232 PANTHER DUF1442 FAMILY PROTEIN 1 228 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g1956 Amo-Chr9 82226842 82228066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g1956 - - adu:107466072 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2367 19 108404363 108405207 Amo09g1956 09 82226842 82228066 hybridization
Amo05g3171 05 93179085 93180008 Amo09g1956 09 82226842 82228066 PCT
Amo09g1956 09 82226842 82228066 Amo05g3171 05 93179085 93180008 PCT