Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1435 ATGGGACATAGTAAGGGCAATGCCATTGATTCAAAACTATATATTAACCTCTATATCTCCCTTGAAATAATCAAACACCAAAACGTAGCAAACAACCAAAAAAAGATAATAATGTCTCTAGTGACCGAAGAGATCAAGGCCAAATCAGAGGTGTACCGAGGAGATGAACTGTGCCAAGAGAAAACACAGCTTCTCCTGAAGGAAGTAGGGTTACCCAATGGGTTACTTCCATTGAAGGACATGGAGGAGTGTGGGTACGAAAAGGAGAGTGGGTTCGTGTGGCTGAAGCAGAAAAAGAGCTCAACACACAAGTTCGAGAAGATTGGGAAGCTTGTGAGTTATGCCCCTGAGGTCACTGCGTATGTTGAGGTTGGGAAGATCAAGAAGCTCACTGGTGTCAAGACCAAGGAGCTTCTTCTTTGGCTCACACTCACTGATATCTATGTCGATAACCCACCGACCGGAAAGATCACTTTCCAGATCTCGTCAGGGCTATCCCGGTCATTTCCGGCTTCCGCCTTCGAAGTCGAAGAGAAAGTTAAGGAGGAGAAGAAGGAGAAGGGGAGTGAAGTTAAAGAAGGAGCTGCCGCTGCTGCTGCTGCTGCAACTGCTGTTCAAGTCAAAGAGGTTTGA 633 0.4613 MGHSKGNAIDSKLYINLYISLEIIKHQNVANNQKKIIMSLVTEEIKAKSEVYRGDELCQEKTQLLLKEVGLPNGLLPLKDMEECGYEKESGFVWLKQKKSSTHKFEKIGKLVSYAPEVTAYVEVGKIKKLTGVKTKELLLWLTLTDIYVDNPPTGKITFQISSGLSRSFPASAFEVEEKVKEEKKEKGSEVKEGAAAAAAAATAVQVKEV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1435 210 SUPERFAMILY At5g01610-like 32 179 IPR036758 -
Amo19g1435 210 PANTHER PLANT/F25P12-18 PROTEIN 39 198 - -
Amo19g1435 210 Pfam Protein of unknown function, DUF538 65 175 IPR007493 -
Amo19g1435 210 Gene3D - 41 185 IPR036758 -
Amo19g1435 210 PANTHER T31J12.3 PROTEIN-RELATED 39 198 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1435 Amo-Chr19 31694462 31695620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1435 - - gmx:100500427 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1435 19 31694462 31695620 Amo19g1435 19 31694462 31695620 ECH
Amo19g1435 19 31694462 31695620 Amo09g0872 09 16043239 16043956 hybridization
Amo16g0407 16 6572763 6573374 Amo19g1435 19 31694462 31695620 PCT
Amo19g1435 19 31694462 31695620 Amo16g0407 16 6572763 6573374 PCT