Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0872 ATGTCTCTAGTGACCGAAGAGATCAAGGCCAAATCAGAGGTGTACCGAGGAGATGAATTGTGCCAAGAGAAAACACAGCTTCTCCTGAAGGAAGTAGGGTTACCCAATGGGTTACTTCCATTGAAGGACATGGAGGAGTGTGGGTACGAAAAGGAGAGTGGGTTCGTGTGGCTGAAGCAGAAAAAGAGCTCAACACACAAGTTCGAGAAGATTGGGAAGCTTGTGAGTTATGCCCCTGAGGTCACTGCGTTTGTTGAGGTTGGGAAGATCAAGAAGCTCACTGGTGTTAAGACCAAGGAGCTTCTTCTTTGGCTCACACTCACTGATATCTATGTCGATAACCCGCCCACCGGAAAGATCACTTTTCAGATCTCGTCAGGGCTATCCCGGTCATTTCCGACTTCCGCCTTCGAAGTCGAAGTGAAAGTTAAGGAGGAGAAGGAGGAGAAGGGGAGTGAAGTTAAAGAAGGAGCTGCCGCTGCTGCTGCTGCAACTGCTGTTCAAGTCAAAGAGAATCCCATGTGCCTTGTAATGCAGCTATATTTATATATTTAA 555 0.4739 MSLVTEEIKAKSEVYRGDELCQEKTQLLLKEVGLPNGLLPLKDMEECGYEKESGFVWLKQKKSSTHKFEKIGKLVSYAPEVTAFVEVGKIKKLTGVKTKELLLWLTLTDIYVDNPPTGKITFQISSGLSRSFPTSAFEVEVKVKEEKEEKGSEVKEGAAAAAAATAVQVKENPMCLVMQLYLYI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0872 184 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Amo09g0872 184 SUPERFAMILY At5g01610-like 3 140 IPR036758 -
Amo09g0872 184 PANTHER PLANT/F25P12-18 PROTEIN 2 162 - -
Amo09g0872 184 Gene3D - 5 147 IPR036758 -
Amo09g0872 184 PANTHER T31J12.3 PROTEIN-RELATED 2 162 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0872 Amo-Chr9 16043239 16043956 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0872 - - gmx:100500427 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1435 19 31694462 31695620 Amo09g0872 09 16043239 16043956 hybridization
Amo16g0407 16 6572763 6573374 Amo09g0872 09 16043239 16043956 PCT
Amo09g0872 09 16043239 16043956 Amo16g0407 16 6572763 6573374 PCT