Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0407 ATGTCTCTGGTAACAGAAGAAATCAAAGCTAGGTCAGAGGTGTATCATGGAGACGAAATGTGTCAGGTGAAGTCGAAGGAGCTTCTAAAGGAGATAGAACTTCCCAACGGTCTGCTGCCATTGAAGGACATGGAGGAGTGCGGCTACGACAGAGGAACGGGGTTCGTGTGGCTGAAGCAGAAGAAACCTTACACACACAAGTTCGAGAAGATTGGGAAGCTTGTGTCGTACGCGGCGGAGGTGACGGCGCAGGTGGAGAAAGGGAAGATCAAGAAGCTGACCGGAGTGAAGACGAAGGAGATTTTGCTGTGGGTTTCGCTCAGTGACATCTACGTCGATGACCCTCCCACCGGCAAGATCACTTTCAAGACGCCCGCAGGGCTATTCAGGTCTTTTCCTGTCTCTGCCTTCGAGATTGAGGAAGAGAAAGACAAGTCCGACGACGTCAAGGCTTCCGCCGCCGCCGCCACCACCACGCAGGTCGATGAAGCCGTTCAGGTCAAGGAGATTCCGTTCTGTGCTGTTTAG 528 0.5303 MSLVTEEIKARSEVYHGDEMCQVKSKELLKEIELPNGLLPLKDMEECGYDRGTGFVWLKQKKPYTHKFEKIGKLVSYAAEVTAQVEKGKIKKLTGVKTKEILLWVSLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEEKDKSDDVKASAAAATTTQVDEAVQVKEIPFCAV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0407 175 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Amo16g0407 175 PANTHER PLANT/F25P12-18 PROTEIN 2 159 - -
Amo16g0407 175 Gene3D - 5 149 IPR036758 -
Amo16g0407 175 SUPERFAMILY At5g01610-like 3 145 IPR036758 -
Amo16g0407 175 PANTHER T31J12.3 PROTEIN-RELATED 2 159 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0407 Amo-Chr16 6572763 6573374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0407 - - vra:106757663 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0407 16 6572763 6573374 Amo16g0407 16 6572763 6573374 ECH
Amo16g0407 16 6572763 6573374 Amo19g1435 19 31694462 31695620 PCT
Amo16g0407 16 6572763 6573374 Amo09g0872 09 16043239 16043956 PCT
Amo19g1435 19 31694462 31695620 Amo16g0407 16 6572763 6573374 PCT
Amo09g0872 09 16043239 16043956 Amo16g0407 16 6572763 6573374 PCT