Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1410 ATGGGGTCTGAAGGTCCTCCAGCGGCAATCACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGTGTTTCGGAAAATCCAACCGAGACGATTGTGAATAATTTGGCAGAGTACATGAAGAAGAAGGGTTTGCCGAAAGGCTTAGTCCTTGGGAGCTGCAACATTCTTGAGACTGCTGGTCAAGAAGCACTTGTTCCCCTGTACCAGACATTGCAATCTGCTATTACCGCCAGGGATTCGGATTCCCAATCTTCGAGTTCCAACAAAATTATTTGGCTGCATTTGGGAGTAAACAGTGGTGCAACAAGGTTTGCTATTGAGAAGCAAGCTGTAAATGAGGCTACTTTCCGTTGCCCCGATGAAATGGGATGGAAGCCGCAGAGAGTCCCCATTATTCCTTCAGATGGTCCAATTTCACATATCCGCACAACTTCCCTTCCTGTGGAGGACATCACCAAGGCCTTGGCAAAGAAGGGTTACGATGTGATGACATCTGATGATGCCGGAAGGTTCGTGTGCAACTATGTTTACTATCATTCCCTCCGATTCGCTGAGCAGAATGAGACCAAGTCCCTATTTGTGCATGTGCCACTCTTCTTTACAATCAATGAAGAGACCCAAATGCACTTTGTCGCCTCCTTGCTAGAGGTACTTTCTTCCATATGTTAG 672 0.4613 MGSEGPPAAITTVHVTGFKKFHGVSENPTETIVNNLAEYMKKKGLPKGLVLGSCNILETAGQEALVPLYQTLQSAITARDSDSQSSSSNKIIWLHLGVNSGATRFAIEKQAVNEATFRCPDEMGWKPQRVPIIPSDGPISHIRTTSLPVEDITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNETKSLFVHVPLFFTINEETQMHFVASLLEVLSSIC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1410 223 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 220 IPR036440 -
Amo19g1410 223 PIRSF Pyrrolidone-crbxlat_pptds 10 223 IPR000816 GO:0005829|GO:0006508|GO:0016920
Amo19g1410 223 Gene3D - 9 222 IPR036440 -
Amo19g1410 223 PANTHER BNAA09G15240D PROTEIN 1 222 - -
Amo19g1410 223 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 222 IPR016125 -
Amo19g1410 223 Pfam Pyroglutamyl peptidase 13 200 IPR016125 -
Amo19g1410 223 CDD Peptidase_C15 12 200 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1410 Amo-Chr19 30528438 30531582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1410 K01304 - gmx:100305735 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1410 19 30528438 30531582 Amo19g1410 19 30528438 30531582 ECH
Amo19g1410 19 30528438 30531582 Amo09g0843 09 15157102 15160163 hybridization
Amo16g0398 16 6486441 6489167 Amo19g1410 19 30528438 30531582 PCT
Amo19g1410 19 30528438 30531582 Amo16g0398 16 6486441 6489167 PCT