Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0843 ATGGGGTCTGAAGGTCCTCCAGCGGCAATCACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGTGTTTCGGAAAATCCAACCGAGACGATTGTGAATAATTTGGCAGAGTACATGAAGAAGAAGGGTTTGCCGAAAGGCTTAGTCCTTGGGAGCTGCAACATTCTTGAGACTGCTGGTCAAGAAGCACTTGTTCCCCTGTACCAGACATTGCAATCTGCTATTACCGCCAGGGATTCGGATTCCCAATCTTCGAGTTCCAACAAAATTATTTGGCTGCATTTGGGAGTAAACAGTGGTGCAACAAGGTTTGCTATTGAGAAGCAAGCTGTAAATGAGGCTACTTTCCGTTGCCCCGATGAAATGGGATGGAAGCCGCAGAGAGTCCCCATTATTCCTTCAGATGGTCCAATTTCACATATCCGCACAACTTCCCTTCCTGTGGAGGACATCACCAAGGCCTTGGCAAAGAAGGGTTACGATGTGATGACATCTGATGATGCCGGAAGGTTCGTGTGCAACTATGTTTACTATCATTCCCTCCGATTCGCTGAGCAGAATGGGACCAAGTCCCTATTTGTGCATGTGCCACTCTTCTTTACAATCAATGAAGAGACCCAAATGCACTTTGTCGCTTCCTTGCTAGAGGTACTTTCTTCCATATGTTAG 672 0.4613 MGSEGPPAAITTVHVTGFKKFHGVSENPTETIVNNLAEYMKKKGLPKGLVLGSCNILETAGQEALVPLYQTLQSAITARDSDSQSSSSNKIIWLHLGVNSGATRFAIEKQAVNEATFRCPDEMGWKPQRVPIIPSDGPISHIRTTSLPVEDITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGTKSLFVHVPLFFTINEETQMHFVASLLEVLSSIC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0843 223 PIRSF Pyrrolidone-crbxlat_pptds 10 223 IPR000816 GO:0005829|GO:0006508|GO:0016920
Amo09g0843 223 Gene3D - 9 222 IPR036440 -
Amo09g0843 223 Pfam Pyroglutamyl peptidase 13 200 IPR016125 -
Amo09g0843 223 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 220 IPR036440 -
Amo09g0843 223 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 222 IPR016125 -
Amo09g0843 223 PANTHER BNAA09G15240D PROTEIN 1 222 - -
Amo09g0843 223 CDD Peptidase_C15 12 200 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0843 Amo-Chr9 15157102 15160163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0843 K01304 - gmx:100305735 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1410 19 30528438 30531582 Amo09g0843 09 15157102 15160163 hybridization
Amo16g0398 16 6486441 6489167 Amo09g0843 09 15157102 15160163 PCT
Amo09g0843 09 15157102 15160163 Amo16g0398 16 6486441 6489167 PCT