Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1226 ATGTCTTATATTAAAAGTGCATTTTCACATCTTTTGCAAGATATCTCAGATTCATTGTTGAAAGTCCTGAAAAAGGATGYAARGGGGGAGTACTCTCTGGAGGTTGCTCTTGATGCTAGTACAAAAGCTGTTCTCCAAGGAGGCATGAATATCTTGCAGGAATTTCGCAAATTGCTAGATCACAACTCTGGGATCCTAGTCAGACTAAGAGAGTTAACCATTGATTTTGTTCAAGAAGGAATTCAAGATTTTTTTAGGCAACTTGAGGATCACTTCCTTCGCTTTTCAGGAAGAAATAATTCTTCAGCTTTTAAAGATCATGGTCTTGTTGAGGGAGCTCAAGGTGATAAAGCTTTTGCTGGTCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAGACTGTCATCCCAAAAATCACTGAGGAAATAGCTACTTCCTTTACTGGTGGTAGTGTTAGAGGCTATGAATATGGACCTGCCTTTGTTCCCGGAGAAATCTGCCGGAAATTTCGATCAGCTGGCGAAAAATTCCTGCACCTGTATGTAAATGTGAGAACTCAGAGGATATCATTTCTCCTAAAGAAGAGGTTTTCCACTCCAAACTGGGTCAAGCATAAGGAGCCAAGGGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGCTATAGGTACTGAAGTGAAGCAGACCTTGCCTCAAGGTAAGCGTAAGCACAGAAGGACTGATAGTAATGGAAGTACTGCTTCATCAAGGCGTAACCCCTTACGAGAGGAGAAATTGAATAGATCAAATACTCAAAAGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCGAAACTATTCAAGCAAAAAGTTGAAATCTTCACAAAAGTAGAATATACACAGGAATCTGTTGTTACAACCATAGTTAAATTGTCCCTTAAAAGTCTACAAGAATTTGTCCGGCTCCAGACCTTTAACCGGAGTGGATTCCAGCAAGTTCAATTGGATATTCAATTCCTGAGGATCCCTTTAAGGGAAATTGTTGAAGATGAAGCTGCYATTGACTTCTTGCTTGATGAGGTGATTGTTGCTACTGCAGAGCGGTGTCTTGATCCAATTCCATTAGAGCCTCCCATACTTGACAAACTTATACAAGCGAAGTTGGCCAAATCCAAGGAGCAAAATGCAATCCCTTCCTAA 1194 0.4028 MSYIKSAFSHLLQDISDSLLKVLKKDXXGEYSLEVALDASTKAVLQGGMNILQEFRKLLDHNSGILVRLRELTIDFVQEGIQDFFRQLEDHFLRFSGRNNSSAFKDHGLVEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKITEEIATSFTGGSVRGYEYGPAFVPGEICRKFRSAGEKFLHLYVNVRTQRISFLLKKRFSTPNWVKHKEPREVHMFVDLFLQELEAIGTEVKQTLPQGKRKHRRTDSNGSTASSRRNPLREEKLNRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLSLKSLQEFVRLQTFNRSGFQQVQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKSKEQNAIPS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1226 397 MobiDBLite consensus disorder prediction 232 268 - -
Amo19g1226 397 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 3 358 - -
Amo19g1226 397 PANTHER UNCHARACTERIZED 3 358 IPR014812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1226 Amo-Chr19 24695233 24698794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1226 K20296 - gmx:100779149 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1226 19 24695233 24698794 Amo19g1226 19 24695233 24698794 ECH
Amo19g1226 19 24695233 24698794 Amo09g0680 09 11070780 11081355 hybridization
Amo16g0547 16 8895502 8900872 Amo19g1226 19 24695233 24698794 PCT
Amo19g1226 19 24695233 24698794 Amo16g0547 16 8895502 8900872 PCT