Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0547 ATGATGGGGAGCGATGGCGACGGTGATGCACCATTATTGGACGATAAAGCAAAGCGAATGAGGGATCTGCTATCCAGTTTTTACGCTCCAAACCCCTCAATGTTGTCTCATTCCCCCACCGCCTCCTCCAAGCATTCAACACCCGACGATATCAACTCCTCCTCCTTCGATCCCAACCATTACATGAACATTCTCGTCAATAACTCCAACTTGGAAGGCCTTCTCAAGCGCCACGTTGATATGGCCGCTGAGATCAAGAATCTCGACACCGACTTGCAGATGCTTGTTTACGAGAATTACAACAAGTTCATCAGCGCCACTGATACTATCAAGAGGATGAAAAGTAATATTTTGGGGATGGAGGGAAATATGGAGTACCTTCTTGAAAAAATCATGTCTGTACAGTCCAGGAGTGACAGTGTTAACACTTCTTTATTTGAGAAGAGGGAGCACATTGAGAAATTGCATCGCACTTGTAATCTTCTTCGAAAAGTTCAGTTCATATATGATCTACCTGATAGACTTGGCAAGTGCATCAAATCAGAAGCCTATGCGGATGCTGTCAGATTCTACACTGGTGCAATGCCAATTTTTAAGGCATATGGAGACTCTTCATTCCATGATTGTAAGCGAGCATCCGATGAAGCAATAGCTATCATAGTTAAAAACTTGCAGGAAAAGCTGTTTTCAGATTCTGAACCTATACAAGTGAGAGCTGAGGCTGCATTGCTGCTTAAGCAGTTGGATTTTCCGGTGGACAATTTGAAGACAAAGCTGTTAGAGAGGTTGGAACATTCCCTTAGAGACATTCAACTGAAACCTGAAGAGATAAAGAATGCTTCACCCTCTGCACGTGAGGTAGCTATTCTCGAATTTGTGGAGGCTATTCATGCATTTCGAGTAATTTTCCCAGATTCAGAAACTCAATTAGTTAAAATTGCTAAAGGCTTGATTACCAGGGACTTTGTAATTACCGAGGAGTATGTAACGACTAGAATTTGTGCGGCAGATCTACTAGGCGTTCTTCGAGTTATTTGGAATGAATCACTCCTGATGGACGAGGTCTTGCAGGATTCAGCTCTATCTGATCATTTTCTTGAGGGTGCTAAGGCTGCTGTCAAGCTATATGTGGAAAGTGCATTTTCTCAACTTTTGCTAGATATCTCAGATTGCCTCTTAAAAATTTTGAAACGAGATGAAACAGAAGAGTACTCCCTGGAAACTGCTCTAGATGCTAGCACAAAACTTGCTCTCCAAGGAGGCAGGAACCTCTTGCTGGATGTTTGCAAGATTCTAGATGATGACTCAGGGATTATAGATAAACTAAGAGAGCCAATAATTGATTGGGTACAAGAAGGGTTACAAGATTTTTTCAGGCAACTTGAGGATCAGTTCCAATCGTTTTCAGGGAAGAATAATTCTTCAGCTACACAAATTCATGGGCTGACAGAGGCAGCTGCTTTTGCTGGCCTTGTCCTAGTGCTGGCTCAATTGTCTGCTTTCATTGAACAAACTGCCATCCCTAAGATCAACGAGGAATTAGCAGTTTCTTTTTCTGCTGGTCCATATGAATATGGACCCGCCTTTGTTCCGGGAGAGATCTCTCGAAAATTTAGATCAGCTGGTGACAAGTTCCTACAGCAGTACATAAATATTCGAACTCAACGAATATCACTACTCCAGAAGAAGAGATTTGCCACACCTAAATGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATCTATTTCTACAAGAGCTCAAGGTCATAGTCAATGAAGTGAAGCAGGTTTTGCCTCAAGATATGCGAAAGCATCGTAGAAGTAACGCAAGCAGTGCTTCGTCGAAAAGTAATTCCTTCCGAGAGGAGAAATTATTGCACCGCTCAAATACTCAAAGGGCGAGGAGCCAGCTTCTGGAAACACATTTAGCCAAACTGTTTAAGCAAAAAACTTTTAACCGGAGTGGATTTCAGCAAATTCAATTGGATATGCAGTTCCTAAGGACTCCTTTAAGGGAAATAGTTGAAGATGAAGCTGCAATGGATTTCTTGCTTGATGAGGTGATTGTTGCTGCTACAGAGAGGTGCCTTGATCCAATTCCATTGGAGTCCCCCATTCTGGACAAACTAATTCAAGCAAAGCTGGCAAAATCTTTGGAGGAGAACACATCCTCTTCATAA 2190 0.4224 MMGSDGDGDAPLLDDKAKRMRDLLSSFYAPNPSMLSHSPTASSKHSTPDDINSSSFDPNHYMNILVNNSNLEGLLKRHVDMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNILGMEGNMEYLLEKIMSVQSRSDSVNTSLFEKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFHDCKRASDEAIAIIVKNLQEKLFSDSEPIQVRAEAALLLKQLDFPVDNLKTKLLERLEHSLRDIQLKPEEIKNASPSAREVAILEFVEAIHAFRVIFPDSETQLVKIAKGLITRDFVITEEYVTTRICAADLLGVLRVIWNESLLMDEVLQDSALSDHFLEGAKAAVKLYVESAFSQLLLDISDCLLKILKRDETEEYSLETALDASTKLALQGGRNLLLDVCKILDDDSGIIDKLREPIIDWVQEGLQDFFRQLEDQFQSFSGKNNSSATQIHGLTEAAAFAGLVLVLAQLSAFIEQTAIPKINEELAVSFSAGPYEYGPAFVPGEISRKFRSAGDKFLQQYINIRTQRISLLQKKRFATPKWVKHKEPREVHMFVDLFLQELKVIVNEVKQVLPQDMRKHRRSNASSASSKSNSFREEKLLHRSNTQRARSQLLETHLAKLFKQKTFNRSGFQQIQLDMQFLRTPLREIVEDEAAMDFLLDEVIVAATERCLDPIPLESPILDKLIQAKLAKSLEENTSSS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0547 729 PANTHER UNCHARACTERIZED 653 690 IPR014812 -
Amo16g0547 729 PANTHER UNCHARACTERIZED 10 653 IPR014812 -
Amo16g0547 729 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 653 690 - -
Amo16g0547 729 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 10 653 - -
Amo16g0547 729 MobiDBLite consensus disorder prediction 604 634 - -
Amo16g0547 729 SUPERFAMILY ARM repeat 206 514 IPR016024 -
Amo16g0547 729 Pfam Vps51/Vps67 51 136 - -
Amo16g0547 729 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0547 Amo-Chr16 8895502 8900872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0547 K20296 - gmx:100818891 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0547 16 8895502 8900872 Amo16g0547 16 8895502 8900872 ECH
Amo16g0547 16 8895502 8900872 Amo19g1226 19 24695233 24698794 PCT
Amo16g0547 16 8895502 8900872 Amo09g0680 09 11070780 11081355 PCT
Amo19g1226 19 24695233 24698794 Amo16g0547 16 8895502 8900872 PCT
Amo09g0680 09 11070780 11081355 Amo16g0547 16 8895502 8900872 PCT