Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0680 ATGATGGTTGCAGATGAAGTGCCACTGGACGACAAAGCAAAGCGGATGAGAGATCTGCTATCGAGTTTCTACTCTCCAGAGTCTGCCATGTCCACCGGCACCGACTCCGCCAAGCACGCCTCACCCGACGATATCAACTCCAACTCCTTCGATCCCGATCACTACATGAACCTCATGGTTCACAAGTCCAATTTGGAAGGGCTGCTTCAGCGCCACGTCGAGATGGCTGCTGAAATCAAGAATCTTGACACTGACTTGCAAATGCTGGTTTACGAGAACTATAACAAGTTCATCAGTGCTACTGATACTATAAAGAGGATGAAAAGTAACATTTCCGGGATGGAGACAAACATGGAGCAGCTTCTTGAGAAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTTAACACTTCTCTTTTTGACAAAAGGGAGCACATAGAGAAGCTGCATCGTACTTGCAATCTTCTCCGTAAAGTTCAGTTCATATATGATCTGCCTGATAGACTTAACAAGTGCATCAAATCGGAAGCTTATGCAGATGCAGTTAGGTTTTACACTGGAGCAATGCCAATTTTAATGGCATATGGAGATTCATCTTTCCGGGATTGCAAGCTAGCCTCTGAGGAAGCAATGGCTACAATAGTAAAAAACTTGCAGGGGAAGCTATTTTCAGATTCTGAATCAATACAAAAGAGAGCTGAAGCTGCAGTGCTCCTTAAGCAGTTGGAATATCCGGTGGACAATTTGAAGGCCAAGTTACTTGAGAAGTTAGATCAATCTCTAAAAGACATTCAACTAAAGCCTGAAGAAATAAAAGATGTATCAGTAGACCTTACTCCTTCTGATTCTGCTCATGAGGCAAGCATTAATGAATTTGTGGAAGCAGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAGAGCAGTTGGTTACACTTGCTAAAGACCTGGTTACCAAGAATTTTGCCATTGCTGAGGAATATGTTCAGACACGAGTTTGTGCAGCAGATCTACTTGGTTTTCTTCGAGTTATTTGGAATGACGTACTCTTGCTAGACGAAGTCTTACAAGAAGCGGCTCTCTCTAACCATTCTCTTGAGGCTGCGAAGGCTGTGGTCATGTCTTATATTAGAAGTGCATTTTCACATCTTTTGCAAGATATCTCAGATTCATTGTTGAAAGTCCTGAAAAAGGATGGAATGGGGGAGTACTCTCTGGAGGTTGCTCTTGATGCTAGTACAAAAGCTGTTCTCCAAGGAGGCATGAATATCTTGCAGGAATTTCGCAAATTGCTAGATCACAACTCTGGGATCCTAGTCAGACTAAGAGAGTTAACCATTGATTTTGTTCAAGAAGGAATTCAAGATTTTTTTAGGCAACTTGAGGATCACTTCCTTCGCTTTTCAGGAAGAAATAATTCTTCAGCTTTAGATCATGGTCTTGTTGAGGGAGCTCAAGGTGATAAAGCTTTTGCTGGTCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAGACTGTCATCCCAAAAATCACTGAGGAAATAGCTACTTCCTTTACTGGTGGTAGTGTTAGAGGCTATGAATATGGACCTGCCTTTGTTCCCGGAGAAATCTGCCGGAAATTTCGATCAGCTGGCGAAAAATTCCTGCACCTGTATGTAAATGTGAGAACTCAGAGGATATCATTTCTCCTAAAGAAGAGGTTTTCCACTCCAAACTGGGTCAAGCATAAGGAGCCAAGGGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGCTATAGGTACTGAAGTGAAGCAGACCTTGCCTCAAGGTAAGCGTAAGCACAGAAGGACTGATAGTAATGGAAGTACTGCTTCATCAAGGCGTAACCCCTTACGAGAGGAGAAATTGAATAGATCAAATACTCAAAAGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCGAAACTATTCAAGCAAAAAGTTGAAATCTTCACAAAAGTAGAATATACACAGGAATCTGTTGTTACAACCATAGTTAAATTGTCCCTTAAAAGTCTACAAGAATTTGTCCGGCTCCAGACCTTTAACCGGAGTGGATTCCAGCAAGTTCAATTGGATATTCAATTCCTGAGGATCCCTTTAAGGGAAATTGTTGAAGATGAAGCTGCAATTGACTTCTTGCTTGATGAGGTGATTGTTGCTACTGCAGAGCGGTGTCTTGATCCAATTCCATTAGAGCCTCCCATACTTGACAAACTTATACAAGCGAAGTTGGCCAAATCCAAGGAGCAAAATGCAATCCCTTCCTAA 2310 0.4195 MMVADEVPLDDKAKRMRDLLSSFYSPESAMSTGTDSAKHASPDDINSNSFDPDHYMNLMVHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLEKIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLNKCIKSEAYADAVRFYTGAMPILMAYGDSSFRDCKLASEEAMATIVKNLQGKLFSDSESIQKRAEAAVLLKQLEYPVDNLKAKLLEKLDQSLKDIQLKPEEIKDVSVDLTPSDSAHEASINEFVEAVRAFRVIFPDSEEQLVTLAKDLVTKNFAIAEEYVQTRVCAADLLGFLRVIWNDVLLLDEVLQEAALSNHSLEAAKAVVMSYIRSAFSHLLQDISDSLLKVLKKDGMGEYSLEVALDASTKAVLQGGMNILQEFRKLLDHNSGILVRLRELTIDFVQEGIQDFFRQLEDHFLRFSGRNNSSALDHGLVEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKITEEIATSFTGGSVRGYEYGPAFVPGEICRKFRSAGEKFLHLYVNVRTQRISFLLKKRFSTPNWVKHKEPREVHMFVDLFLQELEAIGTEVKQTLPQGKRKHRRTDSNGSTASSRRNPLREEKLNRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLSLKSLQEFVRLQTFNRSGFQQVQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKSKEQNAIPS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0680 769 Pfam Vps51/Vps67 45 130 - -
Amo09g0680 769 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 2 730 - -
Amo09g0680 769 MobiDBLite consensus disorder prediction 604 643 - -
Amo09g0680 769 PANTHER UNCHARACTERIZED 2 730 IPR014812 -
Amo09g0680 769 Coils Coil 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0680 Amo-Chr9 11070780 11081355 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0680 K20296 - gmx:100818891 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1226 19 24695233 24698794 Amo09g0680 09 11070780 11081355 hybridization
Amo16g0547 16 8895502 8900872 Amo09g0680 09 11070780 11081355 PCT
Amo09g0680 09 11070780 11081355 Amo16g0547 16 8895502 8900872 PCT