Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0181 ATGGATTGGTTCTCATGGCTTTCAAAAGCAGGCCTTGATCCTTCCCTAGTATATGAATACGGACTCCTCTTTTCACACAACGAGCTTGAAGAAGAAGACATCAAGTACTTCAACCACGAGTTCCTCCAGAGCATGGGGATCTCCATAGCCAAGCACAGGCTGGAGATCCTCAAGCTCGTTCATCGGAACAAGGCCGCCACCGCGGCTACCACGAAGAAGTACATCAAAACCAATAATTACCCTACGATACTCCATGTTTCAAGGATCATGCATGCATTCAAGAAGACAAGAAGGTGCTTGTCAAGTTACTTGAAAACAATGATTGGTTGCGAGGACTCCACGCTCGCCGTGGTTCCAATACCAAGGCCTTGTTCTTCGTATGGAACCACGGCGAAGTGGAAGAGCGCCGTGTTGAAGAGGAACAACACCAAGAATCAAAAGAATTATCTTCATCATCATCATCACCAAGAGAGGCTGTTGCTTACAAATGGAAGCCCTATAACATCATCAACAATGGTGGTTCCTGCATTGCCTGCTCCTGATGGATTCTATAGTAGTCCCATGGTTTACCATTTCCAGAAGGAAGAGAAGATGGACGCCGGCGACGACGACGACGGATATTGGTCTTCTGCGGTTCAAGATTTCAGGTGGGATAGTATGTTCCAAGATCTAAAGCCTAACTGA 684 0.4664 MDWFSWLSKAGLDPSLVYEYGLLFSHNELEEEDIKYFNHEFLQSMGISIAKHRLEILKLVHRNKAATAATTKKYIKTNNYPTILHVSRIMHAFKKTRRCLSSYLKTMIGCEDSTLAVVPIPRPCSSYGTTAKWKSAVLKRNNTKNQKNYLHHHHHQERLLLTNGSPITSSTMVVPALPAPDGFYSSPMVYHFQKEEKMDAGDDDDGYWSSAVQDFRWDSMFQDLKPN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0181 227 CDD SAM_superfamily 2 62 - -
Amo19g0181 227 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Amo19g0181 227 Gene3D - 1 69 IPR013761 -
Amo19g0181 227 Pfam SAM domain (Sterile alpha motif) 23 58 IPR001660 GO:0005515
Amo19g0181 227 PANTHER OSJNBA0033G05.11 PROTEIN 1 227 - -
Amo19g0181 227 PANTHER OSJNBA0033G05.11 PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0181 Amo-Chr19 1981144 1982441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0181 - - adu:107463842 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0181 19 1981144 1982441 Amo19g0181 19 1981144 1982441 ECH
Amo19g0181 19 1981144 1982441 Amo09g0010 09 119203 119886 hybridization
Amo19g0181 19 1981144 1982441 Amo09g0054 09 614215 618994 hybridization
Amo19g0181 19 1981144 1982441 Amo09g0010 09 119203 119886 PCT