Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0010 ATGGATTGGTTCTCATGGCTTTCAAAAGCAGGCCTTGATCCTTCCCTAGTATATGAATACGGACTCCTCTTTTCACACAACGAGCTTGAAGAAGAAGACATCAAGTACTTCAACCACGAGTTCCTCCAGAGCATGGGGATCTCCATAGCCAAGCACAGGCTGGAGATCCTCAAGCTCGTTCATCGGAACAAGGCCGCCACCGCGGCTACCACGAAGAAGTACATCAAAACCAATAATTACCCTACGATACTCCATGTTTCAAGGATCATGCATGCATTCAAGAAGACAAGAAGGTGCTTGTCAAGTTACTTGAAAACAATGATTGGTTGCGAGGACTCCACGCTCGCCGTGGTTCCAATACCAAGGCCTTGTTCTTCGTATGGAACCACGGCGAAGTGGAAGAGCGCCGTGTTGAAGAGGAACAACACCAAGAATCAAAAGAATTATCTTCATCATCATCATCACCAAGAGAGGCTGTTGCTTACAAATGGAAGCCCTATAACATCATCAACAATGGTGGTTCCTGCATTGCCTGCTCCTGATGGATTCTATAGTAGTCCCATGGTTTACCATTTCCAGAAGGAAGAGAAGATGGACGCCGGCGACGACGACGACGGATATTGGTCTTCTGCGGTTCAAGATTTCAGGTGGGATAGTATGTTCCAAGATCTAAAGCCTAACTGA 684 0.4664 MDWFSWLSKAGLDPSLVYEYGLLFSHNELEEEDIKYFNHEFLQSMGISIAKHRLEILKLVHRNKAATAATTKKYIKTNNYPTILHVSRIMHAFKKTRRCLSSYLKTMIGCEDSTLAVVPIPRPCSSYGTTAKWKSAVLKRNNTKNQKNYLHHHHHQERLLLTNGSPITSSTMVVPALPAPDGFYSSPMVYHFQKEEKMDAGDDDDGYWSSAVQDFRWDSMFQDLKPN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0010 227 CDD SAM_superfamily 2 62 - -
Amo09g0010 227 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Amo09g0010 227 Gene3D - 1 69 IPR013761 -
Amo09g0010 227 Pfam SAM domain (Sterile alpha motif) 23 58 IPR001660 GO:0005515
Amo09g0010 227 PANTHER OSJNBA0033G05.11 PROTEIN 1 227 - -
Amo09g0010 227 PANTHER OSJNBA0033G05.11 PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0010 Amo-Chr9 119203 119886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0010 - - adu:107463842 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0181 19 1981144 1982441 Amo09g0010 09 119203 119886 hybridization
Amo19g0181 19 1981144 1982441 Amo09g0010 09 119203 119886 PCT
Amo09g0010 09 119203 119886 Amo09g0010 09 119203 119886 PCT