Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3446 ATGAAGTTGTTGGGTAAGAACCACACGAGCAGCGACAAGAAGAAGAACTACGCAGTGAAACTGAATCAATTGAAGCTTGACACAGGACTGTTTGGAGCAAGAGGAAGGGTTCTAACCGCCGCAAATGACAAGGTTGCCATTCAGATTGTTTCAGAGACATCAACGTCGTCTTCTACGAAGAAGAAACCAAACCCTCCTCCTCCTTCTTCTTCTTCTTCTAAACAACCTCTCTCATCACTTCTCATGATTCCGTTTCATCGGAATCCAAAATCACGATGCACTCACACCACTCCCGCTACAAGATTCCTCAGCTCCACCACAGCAACTTCTTTCACGTGGGACGCACGTGACCTCTCCAATTTCCATCTTCTCCTCAGCTCTTCACATGCCTTAGACATCGCATTTGATTTTCATGTCTTATATGGAGAGGGTGTAGTGGGAGAATCCGACGGCGAAATGACGGTGGTCGGAAAAGCTTCGACGATCGTTGCCGTGGAGGAGGAGATGATGAAGAAGACGGAGTCCAATTCTTCTTCTCATTGGAATCTTCAAAGAAAGCTTCCAATCAAATTGAGGGTCAATGGCTTATCCATCGAAGCCTCCCTTTCGGTCTCAATGAAGTTAATGAAGATGAAGAATTCTGAGGATGACTCGGCAAGACCAATTAAAAACTCGGTTGAGCCAAAGAGACACGCCATCATAGAAAGAGTGAAGTATCTAACAAGCTTGACCAACAGGGGCAAAAACGGAAAACTACATCACACAGGGATTGGAACGGAACAAACGAGTCCATACGAGTCAGATGGATCTCCCGTGTTTGACTCAGATGACTCGTCCGAGTCCACATCAAGCAGTGGGAGTAGTGGTAGTAATAATAGTAGTATTATAATTGAAAATGATCAAAACTCGGGGTCCAGACTCGGTAAAAGTAGTAATAAAAATGGGTGTTGCGAGAGTGAGAGGTTTATGGGGTCATCGGCGCCAAGGACGCGTTTGGATGGAACAGCGAATAGGAGCCGGTTGCAGTTGTCACGGACTAGAAGCTTCACTGAATTTGGATCCAATACAATCACAACTAAACAACAATTTCAACTCACGACTCGTTCAAGTGCTCTCACGAAATCACATGAAGTTTCTTCACATTCACGCTATGAAGACAAGAATTGCAGTTCAAGCAGATGGAAAAGCAAAGAGATTTCAAGCAGGGATGGGAAATTAAAGCTGAAAACAAACGTGTTCTTAGCTTCCTTTGACCAAATGAGTGAACAAGCCTCTGGCGACAGTGCTTGCACAGTGTTAGTTGCCCTCATAGCACACTGGCTCCACTCCAACCACAACATGCCAACAATGTCCCAATTTGACCACCTCATCACACAAGGTTCCTCTGAATGGAGAAAACTATGCAGGAGTGATTACTACTTGAATCTATTCCCTGACAAGCATTTTGACCTTGAGACAGTCCTAGAGGCCAATTTGAGACCCATAATTGTTGTACCACAAGAATCATATACAGGTTTTTTCTCCCCAGAGAAGTTCCAATGCTTGAAAGGTGCTATGTCCTTTGACCAAATTTGGGATGAGATAAGAACCAAGGTGGATGAAAATCATAACAAGCCAAGAATATACATAGTGAGTTGGAATGACCATTTCTTTGTTCTAAAGGTAGAAAAGGATGCTTACTATGTCATTGATTCATTGGGGGAAAGGCTCTATGAAGGGTGCCAACAAGCATTCATATTGAAGTTTGATGAATCTAGTGTTATGTATGGTGCTTCAAGGGGAAACATTGTTGGCGGCAGCGGCGGCAATGGTAGTGGCAGAAGATTCGAGGCGGTTTGCCATGGAAAAGAGTGTTGTAAAGGGTTCATCAAGAGGTTTCTTGCTGCTATACCAGTTAGGCAACTAGAGAAGGAAGAGAAGAAAGGGAATGTTTCAAATCCATTTCTTCACAGGCAATTGCAGATTGACTTCCATTATAGCACCATTTCATCAACTTCTTCTGCTATTAGGCATTAA 2016 0.437 MKLLGKNHTSSDKKKNYAVKLNQLKLDTGLFGARGRVLTAANDKVAIQIVSETSTSSSTKKKPNPPPPSSSSSKQPLSSLLMIPFHRNPKSRCTHTTPATRFLSSTTATSFTWDARDLSNFHLLLSSSHALDIAFDFHVLYGEGVVGESDGEMTVVGKASTIVAVEEEMMKKTESNSSSHWNLQRKLPIKLRVNGLSIEASLSVSMKLMKMKNSEDDSARPIKNSVEPKRHAIIERVKYLTSLTNRGKNGKLHHTGIGTEQTSPYESDGSPVFDSDDSSESTSSSGSSGSNNSSIIIENDQNSGSRLGKSSNKNGCCESERFMGSSAPRTRLDGTANRSRLQLSRTRSFTEFGSNTITTKQQFQLTTRSSALTKSHEVSSHSRYEDKNCSSSRWKSKEISSRDGKLKLKTNVFLASFDQMSEQASGDSACTVLVALIAHWLHSNHNMPTMSQFDHLITQGSSEWRKLCRSDYYLNLFPDKHFDLETVLEANLRPIIVVPQESYTGFFSPEKFQCLKGAMSFDQIWDEIRTKVDENHNKPRIYIVSWNDHFFVLKVEKDAYYVIDSLGERLYEGCQQAFILKFDESSVMYGASRGNIVGGSGGNGSGRRFEAVCHGKECCKGFIKRFLAAIPVRQLEKEEKKGNVSNPFLHRQLQIDFHYSTISSTSSAIRH* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3446 671 MobiDBLite consensus disorder prediction 246 339 - -
Amo18g3446 671 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 10 667 - -
Amo18g3446 671 PANTHER - 10 667 - -
Amo18g3446 671 MobiDBLite consensus disorder prediction 246 319 - -
Amo18g3446 671 MobiDBLite consensus disorder prediction 52 77 - -
Amo18g3446 671 MobiDBLite consensus disorder prediction 368 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3446 Amo-Chr18 137156327 137165559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3446 - - ahf:112707900 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g3446 18 137156327 137165559 Amo18g3446 18 137156327 137165559 ECH
Amo08g2108 08 33943937 33951694 Amo18g3446 18 137156327 137165559 hybridization
Amo16g3646 16 147230335 147234696 Amo18g3446 18 137156327 137165559 PCT
Amo06g2848 06 93839178 93843798 Amo18g3446 18 137156327 137165559 PCT
Amo18g3446 18 137156327 137165559 Amo16g3646 16 147230335 147234696 PCT
Amo18g3446 18 137156327 137165559 Amo06g2848 06 93839178 93843798 PCT