Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2108 ATGACGGTGGTCGGAAAAGCTTCGACGATCGTTGCCGTGGAGGAGGAGATGATGAAGAAGACGGAGTCCAATTCTTCTTCTCATCGGAATCTTCAAAGAAAGCTTCCAATCAAATTGCGGGTCAATGGCTTATCCATCGAAGCCTCCCTTTCGGTGTCAATGAAGTTAATGAAGATGAAGAATTCTGAGGATGACTCGGCAAGACCAATTAAAAACTCGGTTGAGCCAAAGAGACACGCCATCATAGAAAGAGTGAAGTATCTAACAAGCTTGACCAACAGGGGCAAAAACGGAAAACTACTTCACACAGGGATTGGAACGGAACAAACGAGTCCATACGAGTCAGATGGATCTCCCGTGTTTGACTCAGATGACTCGTCCGAGTCCACATCAAGCAGTGGGAGTAGTGGTAGTAATAATAGTAGTATTATAATTGAGAATGATCATAACTCGGGGTCAAGACTCGGTAAAAGTAGTAATAAAAATGGGTGTTGCGACAGTGAGAGGTTTATGGGGTCATCGGCGCCAAGGACGTGTTTGGATGGAACAGCGAATAGGAGCCGGTTGCAGTTGTCACGGACTAGAAGCTTCACTGAATTTGGATCCAATACAATCACAACCAAACAACAATTCCAACTCACGACTCGTTCAAGTGCTCTCACGAAATCACATGAAGTTTCTTCACATTCACGCTATGAAGACAAGAATTGCAGTTCAAGCAGATGGAAAAGCAAAGAGATTTCAAGCAGGGATGGGAAATTAAAGCTGAAAACAAACGTGTTCTTGGCTTCCTTTGACCAAATGAGTGAACAAGCCTCTGGCGACAGTGCTTGCACAGTGTTAGTTGCCCTCATAGCACACTGGCTCCACTCCAACCACAACATGCCAACAATGTCCCAATTTGACCACCTCATCACACAAGGTTCCTCTGAATGGAGAAAACTATGCAGGAGTGATTACTACTTGACTCTATTCCCTGACAAGCATTTTGACCTTGAGACAGTCCTAGAGGCCAATTTGAGACCCATAATTGTTGTACCACAAGAATCATATACAGGTTTTTTCTCCCCAGAGAAGTTCCAATGCTTGAAAGGTGCTATGTCCTTTGACCAAATTTGGGATGAGATAAGAACCAAGGTGGATGAAAATCATAACAAGCCAAGAATATACATAGTGAGTTGGAATGACCATTTCTTTGTTCTAAAGGTAGAAAAGGATGCTTACTATGTCATTGATTCATTGGGGGAAAGGCTCTATGAAGGGTGCCAACAAGCATTCATATTGAAGTTTGATGAATCTAGTGTTATGTATGGTGCTTCAAGCAGAAACATTGTCGGTGGCAATGGTAGTGGCAGAAGATTCGAGGCGGTTTGCCACGGAAAAGAGTGTTGTAAAGGGTTCATCAAGAGGTTTCTTGCTGCTATACAAGTTAGGCAACTAGAGAAGGAAGAGAAGAAAGGGAATGTTTCAAATCCATTTCTTCATAGGCAATTGCAGATCGACTTCCATTATAGCACCATTTCATCAACTTCCTCTGCTATTAGGCATTAA 1551 0.4294 MTVVGKASTIVAVEEEMMKKTESNSSSHRNLQRKLPIKLRVNGLSIEASLSVSMKLMKMKNSEDDSARPIKNSVEPKRHAIIERVKYLTSLTNRGKNGKLLHTGIGTEQTSPYESDGSPVFDSDDSSESTSSSGSSGSNNSSIIIENDHNSGSRLGKSSNKNGCCDSERFMGSSAPRTCLDGTANRSRLQLSRTRSFTEFGSNTITTKQQFQLTTRSSALTKSHEVSSHSRYEDKNCSSSRWKSKEISSRDGKLKLKTNVFLASFDQMSEQASGDSACTVLVALIAHWLHSNHNMPTMSQFDHLITQGSSEWRKLCRSDYYLTLFPDKHFDLETVLEANLRPIIVVPQESYTGFFSPEKFQCLKGAMSFDQIWDEIRTKVDENHNKPRIYIVSWNDHFFVLKVEKDAYYVIDSLGERLYEGCQQAFILKFDESSVMYGASSRNIVGGNGSGRRFEAVCHGKECCKGFIKRFLAAIQVRQLEKEEKKGNVSNPFLHRQLQIDFHYSTISSTSSAIRH* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2108 516 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 512 - -
Amo08g2108 516 PANTHER - 1 512 - -
Amo08g2108 516 MobiDBLite consensus disorder prediction 96 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2108 Amo-Chr8 33943937 33951694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2108 - - ahf:112707900 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2108 08 33943937 33951694 Amo18g3446 18 137156327 137165559 hybridization
Amo16g3646 16 147230335 147234696 Amo08g2108 08 33943937 33951694 PCT
Amo06g2848 06 93839178 93843798 Amo08g2108 08 33943937 33951694 PCT
Amo08g2108 08 33943937 33951694 Amo16g3646 16 147230335 147234696 PCT
Amo08g2108 08 33943937 33951694 Amo06g2848 06 93839178 93843798 PCT