Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2848 ATGAAGAAGATGAAGATGAAGTGGCAGAAGAAAGACAAGTATGTGGTTAAGTTGAATCAATTGAAGTTGGAATTGGGAACTTTTGGAACCGACAACAACGTTAATAACATGTTCGTTATTCAGGTTATGGGAACAGCTACCCAGAAAGTAAAAGCTTCTTCTTCTTCTTCTTCAATTTGGAGAAGCACTCTTTTTCCCTTTCTTCATGGTATTACGAAACCTGCTTATACACACAACACAACCATCAAGACATTTCTGAGTTCTGAAGAACCCACAACTGTCACGTGGTACGCACGTGATCTATCCGGTTTTCAACTTGCACTCAAAGATAACCGGTCCTCAATTGGGGCATGCCACGTGGAATTTCATATCTTACATGGGGAGGATGATGCAGGAGAATGTAAGGCTAATAATATGGTGGTAGCTGGAGAAGTTTCCATGGATGTTACAATGGAAGAGATAACTAAATCTAATTCTCAATTGCTTCATAAAACGCTTCCAATTCAATTGAATCTTCATGGTTTGCACATCAAGTCCACACTTTCGGTCTCTTTGAGCATAATGGACTTGAGGAATTTTCATGATTACTTGCCAAGAACATTTGAAAACATGGGTGAAGTAGAGAACAAACAAAGGGTTATTGAGATGGTGGAGTTTGATCAAAGAACTCAACGGAATCCTTATGAATCGGACGGTTCGACCGAGTTTGATTCCGATGAGTCGACAATTGAGTCCACAAGCAGCAGCAGTGATAGCAGTAGTAGCAATGGAAGCTATTATGGAGGATCAAGAGTGAATAGAAATGGATCAATGTTAGCATGGAGTAGAAGCTTTAAGGAATGTTGGAGGTCTATAGCAGCTAAAAGGAAACAAGAGACTTTCACCTCTCATCTAACTTCTTCTATGGGATGGGAAAATATGGAAGTTAAAAGCAGAGATGGGAATTCCAAGCTGAAAACAAATGTGTTGTTTGCATCATTTGACCAAAGAAGCAAAGAAGCCTCAGGTGATAGTGCATGTTCAGCACTAGCAGTGTTCATAGCACATTGGTTCCTCCATTCTAACAAGGACTTACCAACAAGGTCCCAATTTGATAGGCTCATAACACAAGGTTCCTCTGAATGGAGAAGGCTTTGTAAAATTGGTTCATACTTAAAGCTCTTTCCGGATAAGCATTTTGATTTGGAGACAATCTTGGAAGCTAATTTGAGGCCTTTGATTGTTCTTCCTTCGGAATCTTACACCGGATTCTTCGCCCCGGAGAAGTTCCGGTGCCTACAAGGCGCTATGTCGTTCGACGAGATTTGGGACGAGATAAGTAGGGCTAGTAATGAGTCGAGAGTTTATATTGTGAGTTGGAAGGACCATTTCTTTGTTCTAAAAGTGGAAGAAGATGCTTATTACATAATTGACACTTTAGGGGAAAGATTATTTCAAGGGTGCAAAAGAGCATTCATATTGAAGTTTGATGGTTCAAGTTTGATGCATTCAAAGGTGGAGAAAATGGAGAATGAGCCTTCAAAGAAAATTGTTTGTAAAGGGAAAGAATGTTGTAAAGAGTTCATCAAACTTTTCCTTGCTGCAATGCCACTTAGGCAATTAGAAGAGGAAGAGAGTAAAGGGAATGTTTCTACTACTAATTCTTATCTTCATAGGTTCTTGCAAATTGATGTCCATTTTTGCTCTTCATCATCATTATATTAG 1704 0.3938 MKKMKMKWQKKDKYVVKLNQLKLELGTFGTDNNVNNMFVIQVMGTATQKVKASSSSSSIWRSTLFPFLHGITKPAYTHNTTIKTFLSSEEPTTVTWYARDLSGFQLALKDNRSSIGACHVEFHILHGEDDAGECKANNMVVAGEVSMDVTMEEITKSNSQLLHKTLPIQLNLHGLHIKSTLSVSLSIMDLRNFHDYLPRTFENMGEVENKQRVIEMVEFDQRTQRNPYESDGSTEFDSDESTIESTSSSSDSSSSNGSYYGGSRVNRNGSMLAWSRSFKECWRSIAAKRKQETFTSHLTSSMGWENMEVKSRDGNSKLKTNVLFASFDQRSKEASGDSACSALAVFIAHWFLHSNKDLPTRSQFDRLITQGSSEWRRLCKIGSYLKLFPDKHFDLETILEANLRPLIVLPSESYTGFFAPEKFRCLQGAMSFDEIWDEISRASNESRVYIVSWKDHFFVLKVEEDAYYIIDTLGERLFQGCKRAFILKFDGSSLMHSKVEKMENEPSKKIVCKGKECCKEFIKLFLAAMPLRQLEEEESKGNVSTTNSYLHRFLQIDVHFCSSSSLY* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2848 567 MobiDBLite consensus disorder prediction 220 259 - -
Amo06g2848 567 MobiDBLite consensus disorder prediction 239 259 - -
Amo06g2848 567 PANTHER - 7 565 - -
Amo06g2848 567 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 7 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2848 Amo-Chr6 93839178 93843798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2848 - - aip:107647642 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3646 16 147230335 147234696 Amo06g2848 06 93839178 93843798 hybridization
Amo06g2848 06 93839178 93843798 Amo08g2108 08 33943937 33951694 PCT
Amo06g2848 06 93839178 93843798 Amo18g3446 18 137156327 137165559 PCT
Amo08g2108 08 33943937 33951694 Amo06g2848 06 93839178 93843798 PCT
Amo18g3446 18 137156327 137165559 Amo06g2848 06 93839178 93843798 PCT