Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0445 ATGCAAAATAAATATAGACTTAAATTTTTGTTGTTAGTACTAATCACGCATTTGCGTGAGTCAGGTACTAGTTTGATCATAGAAGCTCTGATACTATGTCATGAAACCAGTTCTCCTAAAGTGTGTGGTACAATGCAGGGAGCGATGATGACGCCGCACATGAATCCAATGGCAACAGAGTATGGCATAGTGTTGAGAGGGAGTGGAAGAATCCAGATAGTGTTTCCAAACGGAACCAATGCAATGGATGCAGAGATCAAAGAAGGGGATGTGTTCTTCATCCCAAGGTACTTCCCTTTCTGCCAAATAGCATCAAAGGACCAACCATTGGAGTTCTTTGGCTTCACCACCTCTGCAAGTAAGAACAGGCCACAGTTTCTTGTGGGAGCCACGTCACTCATGAGGTCCATGATGGGTCCTGAGCTCGCTGCTGCCTTTGGTGTGAGCGAGGAAACCATGCGCCACATGGTTGATGCACAGCATGAGGATGTCATACTTCCATATCCACATCATCAAGATCATAACAAGGAAGTGGTTGAGGTTGACACCATTCCAAAGCTTATAAGGAATGCCATGGTTTTGGGATGGTAA 591 0.4484 MQNKYRLKFLLLVLITHLRESGTSLIIEALILCHETSSPKVCGTMQGAMMTPHMNPMATEYGIVLRGSGRIQIVFPNGTNAMDAEIKEGDVFFIPRYFPFCQIASKDQPLEFFGFTTSASKNRPQFLVGATSLMRSMMGPELAAAFGVSEETMRHMVDAQHEDVILPYPHHQDHNKEVVEVDTIPKLIRNAMVLGW* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0445 196 PANTHER OS03G0336100 PROTEIN 45 176 - -
Amo18g0445 196 PANTHER OS03G0336100 PROTEIN-RELATED 45 176 - -
Amo18g0445 196 Gene3D Jelly Rolls 27 176 IPR014710 -
Amo18g0445 196 SMART Cupin_1_3 16 154 IPR006045 -
Amo18g0445 196 CDD cupin_7S_vicilin-like_C 46 162 - -
Amo18g0445 196 Pfam Cupin 46 153 IPR006045 -
Amo18g0445 196 SUPERFAMILY RmlC-like cupins 46 172 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0445 Amo-Chr18 5910405 5912067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0445 46 166 Miscellaneous Gene Families AT4G36700 41.406 2.91e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0445 - - ahf:112706768 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0445 18 5910405 5912067 Amo18g0445 18 5910405 5912067 ECH
Amo18g0445 18 5910405 5912067 Amo08g1086 08 18322309 18324516 hybridization
Amo18g0445 18 5910405 5912067 Amo13g0338 13 4567467 4570293 PCT
Amo13g0338 13 4567467 4570293 Amo18g0445 18 5910405 5912067 PCT