Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0338 ATGGGAAGAAACATAGGATCCCTGTTGCTGTTGGCTCTTGTTATTGTTGTTCATCATGGAGTTGTTGTGGCCACACCCAAATCAATGGAGCTCTACAAGGATCAGGATGAAGAATATTGGGATGAGAGAAGACCTTCTTCTTCTTCTTCAGATTCAGGGTTTTTGTTGCAAGATGCAAAGAGTGTGGTGAAGACTGAAGCTGGGGAGATGAGAGTGATGAGAAGCTATGATAGTGGTTTTGGTGGTGGCAGAAGGAGTTTCGAGAGGCTCATGCACATTGCATTCATCACCATGGAACCAAGGTCCTTGTTCATTCCTCAGTACCTTGACTCTAATTTGGTCATCTTCATCCGAAGAGGGGAAGTAAAATTGGGATACATGAATGGAGATGAACTAGCAGAGAGAAGATTAAAGAGTGGGGATATATATGTAATTCCAGCAGGATCTCCATTCTATTTTCTCAACATTGGTCAAGGTCAGAGACTTCACATGGTTTGCAGTATTACCCCAGTTCAAGGAACACCCACACCTACCTTCCATTCCTTCTATATTGGTGGTGGTGCCAATCCAGAGTCTATTCTTTTTGGATTTGACCCTGAGATCCTTCAAACTGCATTCAATGCAACAAGAAGGGAACTAGATAGAGTTTTCAGTGCAGAATTAGAAGGACCAATAGTGTTTGTTGGTGATATTCGTGAGCCTAGTTTGTGGACCAAGTTCCTTCAAATGAAGGACCAAGACAAAGCCCAACACTTGAAGAAAATGGTGGTACAAGAACAAGAAGAACATGATGATCATGATCGTGATCATTATGATGAGAAAGAAGAAGATGAAAGGACAAGTTGGTCATGGAGAAAGCTATTGACCAGGATCTTGGGAAATGAGAGCAAGAAGAAAACAGATTACAAGGGCAGCACTGGTGGTTCTCCTGATTCATACAACCTCTATGACAAGAAACCAGATTTCAGAAACAGTTATGGTCATAGCAGTGCTCTTGATGGTGACGAATATCATCCACTCCGAGATGTTAACATCGGCGTTTTCCATGTCAACCTCACTGCGGGATCGATGATGGCTCCTCACGTGAATCCAAGAGCAACAGAATATGGAATCATACTTCGAGGTTCCGGCAGAATCCAAGTGGGGTTTCCAAATGGCACCAATGCTATGAACGCTGAGGTTCGAGTAGGTGACGTGTTCTTTGTCCCTAGATTCTTCCCTTTCTGCCAAATATCGTCAAGGACGGGTCCTTTGGAATTCGTGGGGTTTGCCGATTCTGCCAAAAAGAACTATCCGCAATTTCTGGCAGGATCGGTGTCCCTCGTGAGATCTATGATGGGTCCTGAGCTCGCCGCGGCTTTTGGTGTCCAAGAGGATACCATGCACCGTCTCGGCGATGCTCAGCGCGAGGCCATCATATTGCCTTCCACGTGGGTTCCCGTTGGTGGTGACAAGGAGAAAGGCAAAGAGCCACGTGGCGGAGACAGTGAGGAAAGGGAGAGGGAAAAAGAGCCACGTGGTGGAGATCCCGAGGAGAGGGAGAGAGAAGCTGGTGGTGACGAGGAAAAAGGCAAAGAGCCACGTGGCAGAGATCCTGAGGAGAGGGAGAGAGAAAGGAAGCCGCGTGGTGGTGATGCAGAGGAGAGGGAGAGGGTGCCACGTGGCCGAGGAGGTGGTGATGCGGAAGAGAGGGAGAGGGAGAGTGTGCCACGTGGCAGGGATGTGAAGGGGGAGCCAATGCCAAAGGCGGAGGAAAGAGGTCCTACTGGGAAGGATTTGGCTAAGAATTTAGTTATGGGTATCATTGATGTTTGA 1815 0.4733 MGRNIGSLLLLALVIVVHHGVVVATPKSMELYKDQDEEYWDERRPSSSSSDSGFLLQDAKSVVKTEAGEMRVMRSYDSGFGGGRRSFERLMHIAFITMEPRSLFIPQYLDSNLVIFIRRGEVKLGYMNGDELAERRLKSGDIYVIPAGSPFYFLNIGQGQRLHMVCSITPVQGTPTPTFHSFYIGGGANPESILFGFDPEILQTAFNATRRELDRVFSAELEGPIVFVGDIREPSLWTKFLQMKDQDKAQHLKKMVVQEQEEHDDHDRDHYDEKEEDERTSWSWRKLLTRILGNESKKKTDYKGSTGGSPDSYNLYDKKPDFRNSYGHSSALDGDEYHPLRDVNIGVFHVNLTAGSMMAPHVNPRATEYGIILRGSGRIQVGFPNGTNAMNAEVRVGDVFFVPRFFPFCQISSRTGPLEFVGFADSAKKNYPQFLAGSVSLVRSMMGPELAAAFGVQEDTMHRLGDAQREAIILPSTWVPVGGDKEKGKEPRGGDSEEREREKEPRGGDPEEREREAGGDEEKGKEPRGRDPEERERERKPRGGDAEERERVPRGRGGGDAEERERESVPRGRDVKGEPMPKAEERGPTGKDLAKNLVMGIIDV* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0338 604 PANTHER OS03G0336100 PROTEIN 9 479 - -
Amo13g0338 604 CDD cupin_7S_vicilin-like_C 320 471 - -
Amo13g0338 604 SUPERFAMILY RmlC-like cupins 61 470 IPR011051 -
Amo13g0338 604 CDD cupin_7S_vicilin-like_N 62 235 - -
Amo13g0338 604 Gene3D Jelly Rolls 305 477 IPR014710 -
Amo13g0338 604 Pfam Cupin 313 460 IPR006045 -
Amo13g0338 604 Pfam Cupin 91 174 IPR006045 -
Amo13g0338 604 MobiDBLite consensus disorder prediction 483 591 - -
Amo13g0338 604 MobiDBLite consensus disorder prediction 475 604 - -
Amo13g0338 604 Gene3D Jelly Rolls 48 240 IPR014710 -
Amo13g0338 604 PANTHER OS03G0336100 PROTEIN-RELATED 9 479 - -
Amo13g0338 604 MobiDBLite consensus disorder prediction 257 276 - -
Amo13g0338 604 SMART Cupin_1_3 52 214 IPR006045 -
Amo13g0338 604 SMART Cupin_1_3 313 462 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0338 Amo-Chr13 4567467 4570293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0338 61 474 Miscellaneous Gene Families AT2G18540 28.605 1.44e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0338 - - aip:107629183 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0338 13 4567467 4570293 Amo13g0338 13 4567467 4570293 ECH
Amo18g0445 18 5910405 5912067 Amo13g0338 13 4567467 4570293 PCT
Amo08g1086 08 18322309 18324516 Amo13g0338 13 4567467 4570293 PCT
Amo13g0338 13 4567467 4570293 Amo18g0445 18 5910405 5912067 PCT
Amo13g0338 13 4567467 4570293 Amo08g1086 08 18322309 18324516 PCT