Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0440 ATGGAGATTCAAAGATTGCATGAATGTGTTGCTGAAATGAAGGCAGAGATGATGGACAAGGAGACRACACTTGAGAGCATATCCGAAGAAAATGAAATTCTGAAGAATATGGAATTCAATAAGGTACTGAGTGAAAGTGTGGCTGCAGAAATTGAGGCAGCTAAGGCYGTGGAACGCGTGGCGGCCGTGAAGCTTGGGATTGCAATGGAGGAGGCAGACCGGAGCAACCAGAARGCCGCGAGGATCGCGGAGCAGCTGGAAGAAGCACAAGCATTGAAGTCAGAAATGGAGGCAGAACTTAGAAGGCTTAAGGTACAGTGTGATCAATGGAGAAAGGCTGCAGAAACTGCTGCTTCTCTGCTTTCAACAGGAAAGGGGAAACTCACTGAGAGATCTTTGTCTCTTGACAATAAATACAATATCCCTTTGATGAATAACAAGTATGAGCCTTGTTGTGATGATATCATCATTGATGATGATGATGATTTCCAGAGAAAGAAATATGGTAACATGCTTAAGAAGATTGGGATCTTGTGGAAGAAGCCTCACAAATAA 555 0.4324 MEIQRLHECVAEMKAEMMDKETTLESISEENEILKNMEFNKVLSESVAAEIEAAKAVERVAAVKLGIAMEEADRSNQKAARIAEQLEEAQALKSEMEAELRRLKVQCDQWRKAAETAASLLSTGKGKLTERSLSLDNKYNIPLMNNKYEPCCDDIIIDDDDDFQRKKYGNMLKKIGILWKKPHK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0440 184 Coils Coil 69 113 - -
Amo18g0440 184 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 2 184 IPR029688 -
Amo18g0440 184 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 2 184 - -
Amo18g0440 184 Coils Coil 10 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0440 Amo-Chr18 5834405 5834959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0440 - - aip:107613971 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0440 18 5834405 5834959 Amo18g0440 18 5834405 5834959 ECH
Amo18g0440 18 5834405 5834959 Amo08g1081 08 18227462 18229760 hybridization
Amo18g0440 18 5834405 5834959 Amo13g0344 13 4658797 4660811 PCT
Amo13g0344 13 4658797 4660811 Amo18g0440 18 5834405 5834959 PCT