Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0344 ATGATCAACACCTCTCTTTGTTTTGATTTTAGAAATGGCGGATCCTCTGAAGTTCCTCAGAAGGTTTCGCCGCGTGCGATGCGCCAACTAAGGCCCACCGGTCTAGACACAGACGCTGTATCATCGTTAAGCCAAGCTAATAAAATGTCAAAGGAAAGAAGCCCTAAGATCGCCGACCGCAGATCACCAAGAAGCCCTGTTCCAGAGAGGAAGCGCCCGAGCAAGATATCCGAATTGGAATCACAAGTTTCTCAACTTCAAGAGGATCTGAGGGTGGTAAGGGACCAGCTTATTCTGTCCGAATCGAGCAAGAAGCAAGCTAAGCAAGAGGCTGAGGATGTCAAGGATCAACTGTTAGTCCTATCTGCGAAACTCGAGGATTCGCAGAAGCAAATTCTAGAGCTCTCAGCTACTAAAGAACTTCATGATTCTGAGCTTGAAAAAACCATAGAGGAGCACGAATGCGAACTCGAGGCTTCTAGAAACCGGCTTTCAGTTGACCCTGCTGCACTTGCCTCTGCAATGAATGAAATGCAGCATCTCAAGGCTCAGCTTGGACTGACAGCTAATTGTGAGACTGAACAAATCCAACACATCGAATCCGCGGACACAGAGCTGTTGAGCTTGAAGCAGAACTTGTCAGAAACTCTCTCTCTTGTGGAGGAAATGAAAAATCAATTAAGGAACTGCAAAGAATCTGAAGCTCAGGCCCAAGCTATGGTTAATGAGACTTTGTTGCAACTTGAGGAAGCTAATAGAACTGTAGATCAGCTAAGGACCGATGCTGCGAAGGCCGTTGATGGCTACAACTCCATTGCTTTAGAGTTAGACGAGTCTAGAGCAAGAATCAACTCACTCGAGGAACTTGCGAGCAATCATTCTGGAAATTCTCTGATTGAAGGATTGAAAGAGAGCGAGGATCCTACTCCGATCGAAGGCGAAATTCATGCTTTGAAGGCCGAGGTTGCGCGACTAAGATCTGCTGTAGAAACTGCCGAAACTAATTACCAAGAAGAACAGATTCGAAGCACGGTGCAGCTTAGGAATGCCTATGAGTTGATGGAACAGATAAAATCTGAATCAAACAAGAAGGCATGCGATTTAGAAGCTGAATTGAAAGCGAAGAAAGTTGAAATCGAAGAGTTGAAAGCTAACTTGATGGACAAGGAAACTGAATTGCAAGGTATTGTGGAGGAAAATGAGAATTTGAGTTCAAAGCTTGATGAGAGCATTGCATCCAAAAAGGAGAACAAGCTTAAACAAGAACTTAACAAACTCAATGAATGTGTGGCCGGATTGAAGGCTGATCTGATGGACAAGGAGACAACACTGCAAAGCATATCCGAAGAGAACGAATCGCTGAAATCCGAAATCAACAAGAGCTTGTCAGATGGTGGCAAAGTTAGTAAAGAGGAGGCTGCAGCAGAAGTCGAGGCGGCTAAGGCTGCAGAGCGCGAGGCACTCGCGAAACTTGGGATTGTGATGGAGGAGGCGGATAGGAGCAACCGGAAGGCTGCGAGGGTGGCCGAGCAGCTGGAAGCAGCGCAGGCGGCCAGCTCGGAAATGGAAGCAGAGCTGAGGAGGCTGAAGGTGCAGTCTGATCAATGGAGGAAGGCAGCAGAGGCTGCGGCGGCTATGCTTTCGGCCGGAAACAATGGTAAGATCACAGAGAGAACTGTTTCTTTGGACAGCAACAACTATAAACGGTCACCATTTGGTGAACACATGATGGATGATGATGATGAATACAACAGAAAGAAAAATGGCAACATGCTTAAGAAGATTGGTGTGTTATGGAAGAAGCCTCAGAAATAA 1815 0.4634 MINTSLCFDFRNGGSSEVPQKVSPRAMRQLRPTGLDTDAVSSLSQANKMSKERSPKIADRRSPRSPVPERKRPSKISELESQVSQLQEDLRVVRDQLILSESSKKQAKQEAEDVKDQLLVLSAKLEDSQKQILELSATKELHDSELEKTIEEHECELEASRNRLSVDPAALASAMNEMQHLKAQLGLTANCETEQIQHIESADTELLSLKQNLSETLSLVEEMKNQLRNCKESEAQAQAMVNETLLQLEEANRTVDQLRTDAAKAVDGYNSIALELDESRARINSLEELASNHSGNSLIEGLKESEDPTPIEGEIHALKAEVARLRSAVETAETNYQEEQIRSTVQLRNAYELMEQIKSESNKKACDLEAELKAKKVEIEELKANLMDKETELQGIVEENENLSSKLDESIASKKENKLKQELNKLNECVAGLKADLMDKETTLQSISEENESLKSEINKSLSDGGKVSKEEAAAEVEAAKAAEREALAKLGIVMEEADRSNRKAARVAEQLEAAQAASSEMEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKITERTVSLDSNNYKRSPFGEHMMDDDDEYNRKKNGNMLKKIGVLWKKPQK* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0344 604 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 14 604 IPR029688 -
Amo13g0344 604 MobiDBLite consensus disorder prediction 9 82 - -
Amo13g0344 604 Coils Coil 495 539 - -
Amo13g0344 604 Coils Coil 416 464 - -
Amo13g0344 604 Coils Coil 369 406 - -
Amo13g0344 604 MobiDBLite consensus disorder prediction 35 51 - -
Amo13g0344 604 Coils Coil 143 163 - -
Amo13g0344 604 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 14 604 - -
Amo13g0344 604 Coils Coil 76 131 - -
Amo13g0344 604 Coils Coil 470 490 - -
Amo13g0344 604 Coils Coil 315 342 - -
Amo13g0344 604 Coils Coil 206 296 - -
Amo13g0344 604 MobiDBLite consensus disorder prediction 52 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0344 Amo-Chr13 4658797 4660811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0344 - - gmx:100798862 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0344 13 4658797 4660811 Amo13g0344 13 4658797 4660811 ECH
Amo18g0440 18 5834405 5834959 Amo13g0344 13 4658797 4660811 PCT
Amo08g1081 08 18227462 18229760 Amo13g0344 13 4658797 4660811 PCT
Amo13g0344 13 4658797 4660811 Amo18g0440 18 5834405 5834959 PCT
Amo13g0344 13 4658797 4660811 Amo08g1081 08 18227462 18229760 PCT