Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1081 ATGATAAATGGCTCCTCTGAGGTGTCTCGGAAGGTGTCCCCTCGCGGCCGCGGCGTGCGCCAGCTCAGGCCTTCTGCACTGTACATTGATTCTGCATCAACATTAAATCAAGTTCATAGAACAACATCAAAGGATAGAAGCCCTAAAGTCATTGATAGAAGATCACCTAGAAGCCCTGCTCCTGAGAGGAAAAGGCCAAGCAGAATACCTGGATTGGAATCTCAGGTTTCTCATCTGAGAGAGGATTTGAAGAAAGTGAGGGAGCAGCTAAGTTTATCTGAATCATGCAAGAAACAAGCTCAACAAGAAGCTGAGGAATCCAAGCAAAAACTCTTTGCCTTGTCTCTCAAACTTGAAGAATCACAGCAGCAAGTTCTAAGCCTCACTTCTGCCAATCTTGAAGATTCCCTTACATCTTCCATGATTGAAATTCCTCATTGTGAAAACTCACAGACACAGTATCCAGAATCATCAGATTTGGAACTACTAAACCTGAAACAAAACTTGGCAGAATCTCTTTGTATTTTGAAGAACATGAAAAACCAGCTCAAGGATTGCAAAGAGTCATCTCAGGCAGAACCTTTGGTTGATGAGACTTTGCGAAAACTCGAGGCTGCGAAAAGAACTGTGGAGTTCTTGAGGGCTGATGCTGCTAAATCTGCTACAGAAATAGACCCATCTAGAACGGAAACTCCCTCATCGCATGTAAGCAAACCGCAACCGGCCTCATTAGTAGCAAAATTGTCCACAATGGAAATCTTGTTGATGATCATAAGCATAAGCATGAAGCTGAAAAATTGGAAAAGCAAGAGGGTGCTGATCAAATTGGTTCTGAAATTCAGTTTCTCAAGTCTGAGAAAGAAAGCTGAGATTGAAGATTTGAAGGGTAACTTGTTGGACAAGGAAACAGAGTTGCAGTGCATTGTGGAGGAGAATGAGAAGCTGAATGCAAGGATTGAAATGAACTTGCGTGGAACGCGTGGCGGCCGTGAAGCTTGGGATTGCAATGGAGGAGGCAGACCGGAGCAACCAGAAGCCGCGAGGATCGCGGAGCAGCTGGAAGAAGCACAAGCATTGAAGTCAGAAATGGAGGCAGAACTTAGAAGGCTTAAGGTACAGTGTGATCAATGGAGAAAGGCTGCAGAAACTGCTGCTTCTCTGCTTTCAACAGGAAAGGGGAAACTCACTGAGAGATCTTTGTCTCTTGACAATAAATACAATATCCCTTTGATGAATAACAAGTATGAGCCTTGTTGTGATGATATCATCATTGATGATGATGATGATTTCCAGAGAAAGAAATATGGTAACATGCTTAAGAAGATTGGGATCTTGTGGAAGAAGCCTCACAAATAA 1356 0.4329 MINGSSEVSRKVSPRGRGVRQLRPSALYIDSASTLNQVHRTTSKDRSPKVIDRRSPRSPAPERKRPSRIPGLESQVSHLREDLKKVREQLSLSESCKKQAQQEAEESKQKLFALSLKLEESQQQVLSLTSANLEDSLTSSMIEIPHCENSQTQYPESSDLELLNLKQNLAESLCILKNMKNQLKDCKESSQAEPLVDETLRKLEAAKRTVEFLRADAAKSATEIDPSRTETPSSHVSKPQPASLVAKLSTMEILLMIISISMKLKNWKSKRVLIKLVLKFSFSSLRKKAEIEDLKGNLLDKETELQCIVEENEKLNARIEMNLRGTRGGREAWDCNGGGRPEQPEAARIAEQLEEAQALKSEMEAELRRLKVQCDQWRKAAETAASLLSTGKGKLTERSLSLDNKYNIPLMNNKYEPCCDDIIIDDDDDFQRKKYGNMLKKIGILWKKPHK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1081 451 MobiDBLite consensus disorder prediction 224 242 - -
Amo08g1081 451 MobiDBLite consensus disorder prediction 221 242 - -
Amo08g1081 451 Coils Coil 162 182 - -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 345 451 - -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 3 133 - -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 286 323 - -
Amo08g1081 451 Coils Coil 69 124 - -
Amo08g1081 451 MobiDBLite consensus disorder prediction 1 75 - -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 345 451 IPR029688 -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 3 133 IPR029688 -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 137 250 IPR029688 -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 286 323 IPR029688 -
Amo08g1081 451 MobiDBLite consensus disorder prediction 27 41 - -
Amo08g1081 451 MobiDBLite consensus disorder prediction 42 75 - -
Amo08g1081 451 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 137 250 - -
Amo08g1081 451 Coils Coil 346 380 - -
Amo08g1081 451 Coils Coil 291 318 - -
Amo08g1081 451 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1081 Amo-Chr8 18227462 18229760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1081 - - aip:107613971 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0440 18 5834405 5834959 Amo08g1081 08 18227462 18229760 hybridization
Amo08g1081 08 18227462 18229760 Amo13g0344 13 4658797 4660811 PCT
Amo13g0344 13 4658797 4660811 Amo08g1081 08 18227462 18229760 PCT