Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3075 ATGGCAGAAGCAGTTGAAGCACAGCAACAACAACAAAGAAAAACAACAATGAAGAGAACCCTCCTCATAACTAACTGCATCCTCCTCTCAGTCGGGACCAGCGGCGGCCCTCTCATTATGCGCCTCTACTTCCTCCATGGCGGCCACCGCGTTTGGCTCTCCAGCTGCCTCGAAACTGCCGGATTCCCCATCATGCTCATCCCCCTCATCCTTTCCTACTTCCGCCGCAAAAACAATCGCCACTACCCTTCCGGAACAGAAAAACCTATAACTACGATGGTTTCAATGAAACCGCCACTGTTCTTCGCTGCCGCCTTCATCGGCATCCTCACCGGCCTCGACGACTATCTCTACGCCTGCGGTGTCGCCCGCCTCCCGGTGTCCACCTCCGCCCTTATCATCGCCACACAGCTCGCCTTCACCGCCGTCTTCGCCTTCCTCCTCGTCAGGCAGAAGTTCACGCCGTACTCCGTGAACGCCGTCGTGCTCCTCACCGTTGGCGCGGGGGTGCTGGCACTCCACACTCGCAGTGACCGGCCTGCCGGAGAGTCGACCGTGGAGTATGTGAAGGGTTTCGTTATGACTCTCATGGCGGCAGCTCTGTACGGATTCGTGTTGCCGCTTGTGGAGTTAACTTACAAGAAGGCGAAGCAGAACTTAACTTATTCTTTGGTTATGGAGATTCAGTTCGTGATGTGCTTCTTTGCTACTGTTTTCTGCGTCGCCGGCATGATCATCAACAATGATTTCAAGGTGATTCCAAGAGAAGCAAGGGAATTTGGGCTTGGAAGAGGAAATTACTACGTGGTGATGGTGGCAAGTGCAATTATGTGGCAAGCATTCTTCTTAGGAGCAATAGGAGTTATTTTTTGCTCCTCTTCGTTGCTGTCTGGTATTTTAATTGCTATATTGCTCCCCGTAACGGAAATTTTGGCCGTTATTTTCTACAAGGAGAAGTTCCAAGTTGAGAAAGCGGTTTCTCTTGTGCTTTCCCTGTGGGGCTTTGTGTCCTACTTTTATGGTGAGATTAAGCAAGCCAACAAGGAGAAGAAGATGAAAATGATGGATTCCAAAAACAGTATCCCAGAGACAGAGCAGATTCAAACTCTTGCTGTTAGTCACAGTCCCAATAATATTTAG 1140 0.5035 MAEAVEAQQQQQRKTTMKRTLLITNCILLSVGTSGGPLIMRLYFLHGGHRVWLSSCLETAGFPIMLIPLILSYFRRKNNRHYPSGTEKPITTMVSMKPPLFFAAAFIGILTGLDDYLYACGVARLPVSTSALIIATQLAFTAVFAFLLVRQKFTPYSVNAVVLLTVGAGVLALHTRSDRPAGESTVEYVKGFVMTLMAAALYGFVLPLVELTYKKAKQNLTYSLVMEIQFVMCFFATVFCVAGMIINNDFKVIPREAREFGLGRGNYYVVMVASAIMWQAFFLGAIGVIFCSSSLLSGILIAILLPVTEILAVIFYKEKFQVEKAVSLVLSLWGFVSYFYGEIKQANKEKKMKMMDSKNSIPETEQIQTLAVSHSPNNI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3075 379 Pfam Purine nucleobase transmembrane transport 21 347 - -
Amo17g3075 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 97 176 - -
Amo17g3075 379 PANTHER PURINE PERMEASE 2 7 357 - -
Amo17g3075 379 PANTHER OS09G0467300 PROTEIN-RELATED 7 357 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3075 Amo-Chr17 134644359 134646510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3075 17 352 Organic Solute Cotransporters AT1G28220 57.864 8.46e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3075 - - gmx:100803818 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3075 17 134644359 134646510 Amo17g3075 17 134644359 134646510 ECH
Amo17g3079 17 134757504 134759282 Amo17g3075 17 134644359 134646510 PCT
Amo07g1801 07 53139339 53141227 Amo17g3075 17 134644359 134646510 PCT
Amo17g3075 17 134644359 134646510 Amo07g0292 07 2658090 2658958 PCT