Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g3079 ATGGCAGAACCAGTTGAAGCACAACAACAACAAAGAAAGACAACAATGAAGAGAACCCTCCTCATAACTAACTGCATCCTCCTTTCAGTCGGGACCAGCGGTGGCCCTCTCATTATGCGCCTTTACTTCCTCCATGGCGGCCACCGCGTTTGGCTCTCCAGCTGCCTCGAAACTGCCGGATTCCCCATCATGCTCATACCCCTCATCCTCTCCTACTTCCGCCGCAAAAACAACCGCCACTATCCTTCCGAAACAGAAAATCTTAAAACTACGATGGTTTCAATGAAACCGCCGCTGTTCTTCGCAGCCGCCTTCATCGGCATCCTCACCGGCCTCGACGACTACCTCTACGCCTGCGGTGTCGCCCGCCTCCCGGTGTCCACCTCCGCCCTTATCATCGCCACACAGCTCGCCTTCACCGCCGTCTTCGCCTTCCTCCTCGTCAGGCAGAAGTTCACGCCGTACTCCGTGAACGCCGTCGTGCTCCTCACCGTTGGCGCGGGGGTGCTGGCACTCCACACTCGCAGTGACCGGCCTACCGGAGAGTCGACGGTGGAGTACGTGAAGGGTTTCGTTATGACTCTCATGGCGGCAGCTCTGTACGGATTCGTGTTGCCGCTTGTGGAGTTAACTTACAAGAAGGCGAAGCAGAACTTAACTTATTCTTTGGTTATGGAGATTCAGTTCGTGATGTGCTTCTTTGCTACTGTTTTCTGCGTCGCCGGCATGATCATCAACAATGATTTCAAGGTAATTCCAAGAGAAGCAAGAGAATTTGGGCTTGGAAGAGGAAATTACTATGTGGTGATGGTGGCAAGTGCAATTATGTGGCAAGCATTCTTCTTAGGAGCAATAGGAGTTATTTTTTGCTCCTCTTCATTGCTGTCTGGTATTTTGATTGCTATATTGCTCCCCGTAACGGAAATTTTGGCCGTTATTTTCTACAAGGAGAAGTTCCAAGTTGAGAAAGCGGTTTCTCTTGTGCTTTCCCTGTGGGGCTTTGTGTCCTACTTTTACGGTGAGATTAAGCAAGCCAACAAGGAGAAGATGACAATGATGGATTCCAAAAACAGTGTCCCAGAGACAGAGCAGATTCAGACTCTTGCTGTTAGTCACAGTCCCAATAATATTTAG 1134 0.5026 MAEPVEAQQQQRKTTMKRTLLITNCILLSVGTSGGPLIMRLYFLHGGHRVWLSSCLETAGFPIMLIPLILSYFRRKNNRHYPSETENLKTTMVSMKPPLFFAAAFIGILTGLDDYLYACGVARLPVSTSALIIATQLAFTAVFAFLLVRQKFTPYSVNAVVLLTVGAGVLALHTRSDRPTGESTVEYVKGFVMTLMAAALYGFVLPLVELTYKKAKQNLTYSLVMEIQFVMCFFATVFCVAGMIINNDFKVIPREAREFGLGRGNYYVVMVASAIMWQAFFLGAIGVIFCSSSLLSGILIAILLPVTEILAVIFYKEKFQVEKAVSLVLSLWGFVSYFYGEIKQANKEKMTMMDSKNSVPETEQIQTLAVSHSPNNI* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g3079 377 Pfam Purine nucleobase transmembrane transport 20 346 - -
Amo17g3079 377 PANTHER PURINE PERMEASE 2 8 356 - -
Amo17g3079 377 PANTHER OS09G0467300 PROTEIN-RELATED 8 356 IPR030182 GO:0015211|GO:0016021
Amo17g3079 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 96 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g3079 Amo-Chr17 134757504 134759282 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g3079 16 349 Organic Solute Cotransporters AT1G28220 58.209 1.92e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g3079 - - gmx:100803818 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3079 17 134757504 134759282 Amo07g1801 07 53139339 53141227 hybridization
Amo17g3079 17 134757504 134759282 Amo17g3075 17 134644359 134646510 PCT