Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0292 ATGGGTGTCCTTGGAACAGTGGCAAGAAATTTGGATACAATAGTAGGGCCAGGAGCAATGCTTCTTTACCCTCTATATGCATCAATGAGGGCGATTGAGAGTCCTTCAACCTTAGATGATCAACAGTGGCTAACGTATTGGGTTTTGTACTCCTTCATAACCCTCTTTGAGCTTTCATTTCATAAGGTCCTATCTTGGTTGCCGTTTTGGCCATACATGAAGCTTGTAATATGCATGTGGCTGGTGCTGCCAATGTTCAATGGAGCAGCATATATATATGAGAATTATGTGAGGAGATACATAAATGTAACGAGCTATGGAGCTAATGATTATACCATGAAGAACAAGAAGGCGATTCAGATGATGAGCTTTGATGCTAGGAAAGCTGTTGAACGCTACATCGATAGGCATGGCCCTCAAGCCTTTGAAAAAGTTATCAGTGCTGCTGAGAGAGAAGCAAACAAGCACTGA 471 0.4225 MGVLGTVARNLDTIVGPGAMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSFHKVLSWLPFWPYMKLVICMWLVLPMFNGAAYIYENYVRRYINVTSYGANDYTMKNKKAIQMMSFDARKAVERYIDRHGPQAFEKVISAAEREANKH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0292 156 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Amo07g0292 156 PANTHER HVA22-LIKE PROTEIN 3 148 - -
Amo07g0292 156 PANTHER HVA22-LIKE PROTEINS 3 148 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0292 Amo-Chr7 2658090 2658958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0292 K17279 - gmx:100819566 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0745 01 10408312 10410394 Amo07g0292 07 2658090 2658958 PCT
Amo07g0292 07 2658090 2658958 Amo01g0745 01 10408312 10410394 PCT
Amo17g3075 17 134644359 134646510 Amo07g0292 07 2658090 2658958 PCT