Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2810 ATGGAACATCAAGATTTAGTGGATAAGAATGAAGAGAGTGTTGAATCGATCGAAAAGGTTAACAATACTGAAGATCAGGATAAGATGAATGAGGTTGAAGGTGTGAAATCTGAGTTGGTTAATGTTGATGAGAGCAAGGATTTGCAATCTGAAACTAGTTCTATTCAAGAAGTGCAAGGGAGTAATTCCAAGGGATCTGAAGCTGAAATTAAAGTCAATACTAATGGACAAGAGTACTCTGGTGATAAAGAGGGTTCCAATGGAGATTGTGAGCCTGAAAGACTAGAGCCAAATCTGGATAAAGAGAAGGATGACAGAAGAGACATGGAATCAGCACATATGAATGAAAAGGTGGATGAAGTTCTGGGTGAGGACCACAATATGGAGCCTGTATTTGATGGAACAGAGGTTCCTGGGCTGGAAGGTCTCCGGATCACTTCTACTCGTAAGCAGGATGGAGATCAAGAGTCGCCGCGAATGGTGGAGAAGGCGGTGGCTCTGAAAAACTTTGTTAAGGAGAAAAGTGCAGTGGCAGTGTCCACCATGCTCCGCCGCCTATCTGGAAGACGCGGCGAAGGAGATTTGGGTAATTTTGATGATGAAGGTAAGGATATCTCAGATCCCTCAAAAGAGGGTGAATCAACTGTTGCTGAAAAGGGAGGGCAGAAATCTGCATGGAATCCGTTGAATTATATTAAGAAGTCATCTGATGTTGATGGAGAAAACAAAACCGAGCAGGGGGATTCGGTGAATGAAAATCCAAATATCCCCATCGACATGAAAGGAAGGATTATACTGTACTCCAAACTTGGCTGCCAAGAATCCAAAGAGATAAGGCTCTTCTTGCGTGCGAAAAGGCTTAGATTTGTTGAAATCAACCTAGATGTTTATCCCAGCAGAGAGAAAGAGCTGGAGAAGTTTTCTGGATCTACATCTGTTCCAAAGGTTTATTTCAATGAGATACTTATAGGTGGCTTGAGTGAGCTAAAGACCTTAAAAGAGTCCGGCAACCTCGATGAGAAGATCGACTTTCTCATCGGTGAAGCACCATTGTTCGAAGCACCACAGCCGCCTCTTTCTGGTGAGGATGATGATTCCAGTAGTGGGGCAATTGATGAATTTGCAGTAATTGTCCGCAAAATGAAAGAGTCTATTCCTGTGAAGGACAGATTTCACAAAATGCGCAGGTTCACTAACTGTTTTCTTGGGTCAGAAGCTGTAGATTTCTTGTCTGAAGATCAGTATCTGGAAAGGCCAGAGGCTGTTGAGTTTGGACGAAAGCTTGCTAGCAAACTCTTCTTTTATCATGTTCTTGATGAGAATATATTTGAAGATGGTAATCATTTGTATCGGTTCTTGGATGATGATCCAATTGTGGCTTCACAATGCTACAACATTCCGAAGGGTATAGCTACTGTGAAGCCGAAACCTATAGCAGAAATTGCATCAAGGCTGAGGTTTCTGTCTTATGCAATGTTTGAAGCCTATGTTTTTGAAGATGGACGTCGTGTTGATTACACAAGTTTGCATGCAAGTGGGGAGTTTGCAAGGTATTTGAGAACTGTTGAAGAGCTTCAAAGAGTGGAAATTTGGGATATGTCTAGGGAAGAGAAGCTTGCTTTCTTTATCAATCTTTACAATATGATGGCAATCCATGCAATATTGGTATTAGGTCATGCCTCTGGAGCAATGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGATCCTCCTACTCTCTTTCAGCTATTCAAAATGGTATATTGAGGGGAAACCAGCGACCTCCTTATAACCTTAAGAAGCCATTTGGTTCAAAAGATAGACGCTTAAAGGTGGCACTCCCTTACCCTGAACCTCTCATTCATTTTGCTTTGGTGTGTGGTAGCCGATCAGGGCCTGCACTTAGGTGCTATTCACCTGGAAAAATCGACGAGGAATTAACGGATGCAGCACGCAATTTCTTGAGAAGCGGAGGCATTCTGATTGATTTGGCTGCTAAGGATGCATCTGCCAATAAGATCCTTAAATGGTACAGTATAGATTTTGGCAAGAGCGAGGTGGAGGTACTGAAGCATGTGTCAAACTACCTAGATCCATCTAATTCAGAGGTATTATTGGACATGCTTGCCACTTCTGAGTTTAAGGTCACATATCAACCTTATGAATGGGGTTTGAACGCCTAG 2193 0.4223 MEHQDLVDKNEESVESIEKVNNTEDQDKMNEVEGVKSELVNVDESKDLQSETSSIQEVQGSNSKGSEAEIKVNTNGQEYSGDKEGSNGDCEPERLEPNLDKEKDDRRDMESAHMNEKVDEVLGEDHNMEPVFDGTEVPGLEGLRITSTRKQDGDQESPRMVEKAVALKNFVKEKSAVAVSTMLRRLSGRRGEGDLGNFDDEGKDISDPSKEGESTVAEKGGQKSAWNPLNYIKKSSDVDGENKTEQGDSVNENPNIPIDMKGRIILYSKLGCQESKEIRLFLRAKRLRFVEINLDVYPSREKELEKFSGSTSVPKVYFNEILIGGLSELKTLKESGNLDEKIDFLIGEAPLFEAPQPPLSGEDDDSSSGAIDEFAVIVRKMKESIPVKDRFHKMRRFTNCFLGSEAVDFLSEDQYLERPEAVEFGRKLASKLFFYHVLDENIFEDGNHLYRFLDDDPIVASQCYNIPKGIATVKPKPIAEIASRLRFLSYAMFEAYVFEDGRRVDYTSLHASGEFARYLRTVEELQRVEIWDMSREEKLAFFINLYNMMAIHAILVLGHASGAMERRKLFGEFKYVIGGSSYSLSAIQNGILRGNQRPPYNLKKPFGSKDRRLKVALPYPEPLIHFALVCGSRSGPALRCYSPGKIDEELTDAARNFLRSGGILIDLAAKDASANKILKWYSIDFGKSEVEVLKHVSNYLDPSNSEVLLDMLATSEFKVTYQPYEWGLNA* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2810 730 SUPERFAMILY Thioredoxin-like 262 342 IPR036249 -
Amo17g2810 730 Pfam Glutaredoxin 264 320 IPR002109 -
Amo17g2810 730 SMART DEP_3 381 454 IPR000591 GO:0035556
Amo17g2810 730 MobiDBLite consensus disorder prediction 189 222 - -
Amo17g2810 730 CDD DEP 373 451 - -
Amo17g2810 730 MobiDBLite consensus disorder prediction 189 217 - -
Amo17g2810 730 Pfam Protein of unknown function, DUF547 532 658 IPR006869 -
Amo17g2810 730 ProSiteProfiles DEP domain profile. 381 454 IPR000591 GO:0035556
Amo17g2810 730 Gene3D - 372 495 IPR036388 -
Amo17g2810 730 Gene3D Glutaredoxin 259 344 - -
Amo17g2810 730 SUPERFAMILY "Winged helix" DNA-binding domain 373 462 IPR036390 -
Amo17g2810 730 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 729 - -
Amo17g2810 730 MobiDBLite consensus disorder prediction 1 45 - -
Amo17g2810 730 MobiDBLite consensus disorder prediction 84 131 - -
Amo17g2810 730 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 385 452 IPR000591 GO:0035556
Amo17g2810 730 MobiDBLite consensus disorder prediction 234 254 - -
Amo17g2810 730 MobiDBLite consensus disorder prediction 1 160 - -
Amo17g2810 730 ProSiteProfiles Glutaredoxin domain profile. 252 349 - -
Amo17g2810 730 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 729 - -
Amo17g2810 730 MobiDBLite consensus disorder prediction 46 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2810 Amo-Chr17 129867751 129871675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2810 - - ccaj:109797380 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2810 17 129867751 129871675 Amo17g2810 17 129867751 129871675 ECH
Amo08g0754 08 13260494 13264755 Amo17g2810 17 129867751 129871675 hybridization
Amo17g1772 17 80016856 80030525 Amo17g2810 17 129867751 129871675 PCT
Amo17g2810 17 129867751 129871675 Amo17g1772 17 80016856 80030525 PCT