Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo17g1772 | ATGGAAAAGGAGGGGCCAAAAGAATCGAAGGAAATAAATCCTCATGCATTTGAAAAGTTAGAAGAAAACACATTCTCGATCAATAATGAAGACCAATACGTGGAATCAAGGAAATCAGAGAGTCAAAATTTTGTTCATTATGAACTTGATTATGACAACAAACAAGTTGATGTATTTCCCATTCAGAAGGTTTATAATCAAGATCAAAAACCAAAGGAGTCAGAAGCTCAAATTATTGGTCATGATAACCGTGAAGAGTTTGACAATGAAGTAGATTCATTAAAAAAGATAAATGAGGTCATAGATATAAAATCCAATGTTCACCATGAGGAAGATGCAAGTAGTTCAACGAGATATGAAACTCAATTCAATGTTGATAATGGAACAGAGTATTTTGGTACCCAATATATTGGATTTTATAATGCAGATGAAGAAAACAAAAGTATAGAATCGACGTGGAATGCGGAAACGAATAACTTGATGATTGTTAACGATGAAATTGAGTATGTTGGTGCTCAACAAAACGGATTCTATAAATCCAAGGAACAAAGCAGAAGTATAGAATCAACATCAAACGAAAACAATGATGTGAAGTTTGAAAACATTGAAATTCAACTCATTGTTGATGGAACAAAGTATTTTGGTGCTCAACATAACGAATTCCATAAATCCAAGAAAGAAACTGAAAGTACAGAGTCAACGTCAAACGAGAACAGCAACGATGTGAATCTGGCAAATGAAAAGGCAAAAGTTTGTAGAACAGCGACCACGGTCAGCAACAACCATAGAAACACATCTTCTACTAATGTTTACGATGTAAACTACTCAGAGGAACAACCAAGCATGGTTGAAAAGGCTGTAGCACTTAGAAACTTTGTTAGACAGAAAAGCATGGTAGTAGTGTCCTCTATGTTGCGTCATCTTTCCAGAAAATCCGAGGAAAAAGTAGTAGTAGCTAGTAACTTCGACGATAACGTTAAAGATAGTGAATCTAAGAAGGACATTTGTGACAATGATGCAAAAGAAAACAATGATCAAAAAATTGATTTAGTAATCAAAGGTCCACTAGAACCATTAGCCATAAAAGGAAGGGTAATATTGTACACAAAGCTAGGATGCCCTGAAAGCAGAGAGGTTAGACTATTTTTGAACAGTAAAAGGCTTAGATATATTGAAATTAACATTGATGTGTATACTAGTAGAAAGAAGGAATTGGAGAAACGTAGTGGATCTAACTCTGTTCCTAAGGTATTTTTCAATGAAATTCTTATAGGAGGATTAAGTGAATTAAAGGCTTTAGAAGAGTCTGGAGAGCTTGGTGATAAGATTGACTATCTTATTAGTGACACACCTTCCTTTCAAGCACCGTTACCACCGTTTTCTGGAGAGGATGATCCATCTTGCAGTGGGTCGATTGATGAATTGGCTCTGATTGTTTGCAATATGAAAAAATCTATTGTTGTGAAGGATCGGTTTTGCAAAATGAGGAGATTCACTAACTGTTTTGTTGGTTTCGAAGCTGTGGACTTCTTATCACAAGATCAATATTTGGAAAGGAAAGAGGTGAGTCATGCCTTATGTCTTAAGCATGATCTAATGGCTGTAGAGTTTGGTCGAAAGCTCGCTAGAAAACTATTTTTTCGCCATGTTCTTGATGAGCATGTATTTGAGGATAGTAACCACTTATACCGATTTCTAGATGATGATCCAATCGTGGCATCATGCCAAAACATTCTGAGAGGAATAATTACTACGAGGCCTAAGCCTATTGCAGAAATTGCATCCAGATTAAGGTTTCTTTGTTATGCAATCTTTGAAGCTTATGCATCTGAAGATGGACGCCATGTTGATTATAGAAGCATACATGGTAGTGAGGAATTTGCAAGGTATCTAAGAATAGTAGAAGAGCTTCAAAGAGTTGAATTATGGGATTTGTCCAGAGAAGAAAAGCTTTCTTTTTTCATTAATCTTTACAATATGATGTCCATCCATGCAATTTTAGTATGGGGTCACCCAGATGGAACACTAGAGAAAAGAAAATTTTTTGCAGATTTTAGATATGTTATTGGTGGAAATACCTACACACTTTTAGCTATTCAGAATGGTATTTTGAGGGGAAATCAACGACCGCCATATAATCTTATGAAGACATTTAGTGCAAAAGATAAACGATTGAAGGTATCCCTTCCTTACCCTGAGCCTCTCATACATTTCGCTTTAGTATTTGGTAGTCGGTCAGGGCCTGCTCTTCGGTGTTATTCTGTTGGAGACATTGACCAAGAATTAGTGGACGCTGCCCGTAGTTTCTTGAAAAGTGGGGGTCTGTCGATTGATTATTCCGCCAAAGTTGCATATGCCAGCAAGATCCTTAAATGGTTTAGTGTAGATTTTGGCAAGAATGAGGTGGAGGTATTGAAGCATGTGTCGAACTACCTAGACCCAAATGAATCAGAAAATAATGTATAA | 2466 | 0.3637 | MEKEGPKESKEINPHAFEKLEENTFSINNEDQYVESRKSESQNFVHYELDYDNKQVDVFPIQKVYNQDQKPKESEAQIIGHDNREEFDNEVDSLKKINEVIDIKSNVHHEEDASSSTRYETQFNVDNGTEYFGTQYIGFYNADEENKSIESTWNAETNNLMIVNDEIEYVGAQQNGFYKSKEQSRSIESTSNENNDVKFENIEIQLIVDGTKYFGAQHNEFHKSKKETESTESTSNENSNDVNLANEKAKVCRTATTVSNNHRNTSSTNVYDVNYSEEQPSMVEKAVALRNFVRQKSMVVVSSMLRHLSRKSEEKVVVASNFDDNVKDSESKKDICDNDAKENNDQKIDLVIKGPLEPLAIKGRVILYTKLGCPESREVRLFLNSKRLRYIEINIDVYTSRKKELEKRSGSNSVPKVFFNEILIGGLSELKALEESGELGDKIDYLISDTPSFQAPLPPFSGEDDPSCSGSIDELALIVCNMKKSIVVKDRFCKMRRFTNCFVGFEAVDFLSQDQYLERKEVSHALCLKHDLMAVEFGRKLARKLFFRHVLDEHVFEDSNHLYRFLDDDPIVASCQNILRGIITTRPKPIAEIASRLRFLCYAIFEAYASEDGRHVDYRSIHGSEEFARYLRIVEELQRVELWDLSREEKLSFFINLYNMMSIHAILVWGHPDGTLEKRKFFADFRYVIGGNTYTLLAIQNGILRGNQRPPYNLMKTFSAKDKRLKVSLPYPEPLIHFALVFGSRSGPALRCYSVGDIDQELVDAARSFLKSGGLSIDYSAKVAYASKILKWFSVDFGKNEVEVLKHVSNYLDPNESENNV* | 822 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo17g1772 | 821 | ProSiteProfiles | Glutaredoxin domain profile. | 353 | 450 | - | - | |
| Amo17g1772 | 821 | MobiDBLite | consensus disorder prediction | 222 | 246 | - | - | |
| Amo17g1772 | 821 | SMART | DEP_3 | 482 | 567 | IPR000591 | GO:0035556 | |
| Amo17g1772 | 821 | Pfam | Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) | 486 | 565 | IPR000591 | GO:0035556 | |
| Amo17g1772 | 821 | ProSiteProfiles | DEP domain profile. | 482 | 567 | IPR000591 | GO:0035556 | |
| Amo17g1772 | 821 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Amo17g1772 | 821 | Pfam | Protein of unknown function, DUF547 | 644 | 770 | IPR006869 | - | |
| Amo17g1772 | 821 | Gene3D | - | 471 | 572 | IPR036388 | - | |
| Amo17g1772 | 821 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Amo17g1772 | 821 | Pfam | Glutaredoxin | 365 | 421 | IPR002109 | - | |
| Amo17g1772 | 821 | PANTHER | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE | 1 | 818 | - | - | |
| Amo17g1772 | 821 | CDD | DEP | 474 | 564 | - | - | |
| Amo17g1772 | 821 | SUPERFAMILY | Thioredoxin-like | 362 | 443 | IPR036249 | - | |
| Amo17g1772 | 821 | SUPERFAMILY | "Winged helix" DNA-binding domain | 474 | 579 | IPR036390 | - | |
| Amo17g1772 | 821 | PANTHER | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE | 1 | 818 | - | - | |
| Amo17g1772 | 821 | Gene3D | Glutaredoxin | 360 | 445 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo17g1772 | Amo-Chr17 | 80016856 | 80030525 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo17g1772 | - | - | aip:107607381 | 1531.15 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo17g1772 | 17 | 80016856 | 80030525 | Amo08g0754 | 08 | 13260494 | 13264755 | PCT | |
| Amo17g1772 | 17 | 80016856 | 80030525 | Amo17g2810 | 17 | 129867751 | 129871675 | PCT | |
| Amo08g0754 | 08 | 13260494 | 13264755 | Amo17g1772 | 17 | 80016856 | 80030525 | PCT | |
| Amo17g2810 | 17 | 129867751 | 129871675 | Amo17g1772 | 17 | 80016856 | 80030525 | PCT |