Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0754 ATGGAACATCAAGATTTAGTGGATAAGAATGAAGAGAGTGTTGAATCGATCGAAAAGGTTAACAATACTGAAGATCAGGATAAGATGAATGAGGTTGAAGGTGTGAAATCTGAGTTGGTTAATGTTGATGAGAGCAAGGATTTGCAATCTGAAACTAGTTCTATTCAAGAAGTGCAAGGGAGTAATTCCAAGGGATCTGAAGCTGAAATTAGAGTCAATACTAATGGACAAGAGTACTCTGGTGATAAAGAGGGTTCCAATGGAGATTGTGAGCCTGAAAGACTAGAGCCAAATCTGGATAAAGAGAAGGATGACAGAAGAGACATGGAATCAGCACATATGAATGAAAAGGTGGATGAAGTTCTGGGTGAGGACCACAATATGGAGCCTGTATTTGATGGAACAGAGGTTCCTGGGCTGGAAGGTCTCCGGATCACTTCTACTCGTAAGCAGGATGGAGATCAAGAGTCGCCGCGAATGGTGGAGAAGGCGGTGGCTCTGAAAAACTTTGTTAAGGAGAAAAGTGCAGTGGCAGTGTCCACCATGCTCCGCCGCCTATCTGGAAGACGCGGCGAAGGAGATTTGGGTAATTTTGATGATGAAGGTAAGGATATCTCAGATCCCTCAAAAGAGGGTGAATCAACTGTTGCTGAAAAGGGAGGGCAGAAATCTGCATGGAATCCGTTGAATTATATTAAGAAGTCATCTGATGTTGATGGAGAAAACAAAACCGAGCAGGGGGATTCGGTGAATGAAAATCCAAATATCCCCATCGACATGAAAGGAAGGATTATACTGTACTCCAAACTTGGCTGCCAAGAATCCAAAGAGATAAGGCTCTTCTTGCGTGCGAAAAGGCTTAGATTTGTTGAAATCAACCTAGATGTTTATCCCAGCAGAGAGAAAGAGCTGGAGAAGTTTTCTGGATCTACATCTGTTCCAAAGGTTTATTTCAATGAGATACTTATAGGTGGCTTGAGTGAGCTAAAGACCTTAAAAGAGTCCGGCAACCTCGATGAGAAGATCGACTTTCTCATCGGTGAAGCACCATTGTTCGAAGCACCACAGCCGCCTCTTTCTGGTGAGGATGATGATTCCAGTAGTGGGGCAATTGATGAATTTGCAGTAATTGTCCGCAAAATGAAAGAGTCTATTCCTGTGAAGGACAGATTTCACAAAATGCGCAGGTTCACTAACTGTTTTCTTGGGTCAGAAGCTGTAGATTTCTTGTCTGAAGATCAGTATCTGGAAAGGCCAGAGGCTGTTGAGTTTGGACGAAAGCTTGCTAGCAAACTCTTCTTTTATCATGTTCTTGATGAGAATATATTTGAAGATGGTAATCATTTGTATCGGTTCTTGGATGATGATCCAATTGTGGCTTCACAATGCTACAACATTCCGAAGGGTATAGCTACTGTGAAGCCGAAACCTATAGCAGAAATTGCATCAAGGCTGAGGTTTCTGTCTTATGCAATGTTTGAAGCCTATGTTTTTGAAGATGGACGTCGTGTTGATTACACAAGTTTGCATGCAAGTGGGGAGTTTGCAAGGTATTTGAGAACTGTTGAAGAGCTTCAAAGAGTGGAAATTTGGGATATGTCTAGGGAAGAGAAGCTTGCTTTCTTTATCAATCTTTACAATATGATGGCAATCCATGCAATATTGGTATTAGGTCATGCCTCTGGAGCAATGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGATCCTCCTACTCTCTTTCAGCTATTCAAAATGGTATATTGAGGGGAAACCAGCGACCTCCTTATAACCTTAAGAAGCCATTTGGTTCAAAAGATAGACGCTTAAAGGTGGCACTCCCTTACCCTGAACCTCTCATTCATTTTGCTTTGGTGTGTGGTAGCCGATCAGGGCCTGCACTTAGGTGCTATTCACCTGGAAAAATCGACGAGGAATTAACGGATGCAGCACGCAATTTCTTGAGAAGCGGAGGCATTCTGATTGATTTGGCTGCTAAGGATGCATCTGCCAATAAGATCCTTAAATGGTACAGTATAGATTTTGGCAAGAGCGAGGTGGAGGTACTGAAGCATGTGTCAAACTACCTAGATCCATCTAATTCAGAGGTATTATTGGACATGCTTGCCACTTCTGAGTTTAAGGTCACATATCAACCTTATGAATGGGGTTTGAACGCCTAG 2193 0.4227 MEHQDLVDKNEESVESIEKVNNTEDQDKMNEVEGVKSELVNVDESKDLQSETSSIQEVQGSNSKGSEAEIRVNTNGQEYSGDKEGSNGDCEPERLEPNLDKEKDDRRDMESAHMNEKVDEVLGEDHNMEPVFDGTEVPGLEGLRITSTRKQDGDQESPRMVEKAVALKNFVKEKSAVAVSTMLRRLSGRRGEGDLGNFDDEGKDISDPSKEGESTVAEKGGQKSAWNPLNYIKKSSDVDGENKTEQGDSVNENPNIPIDMKGRIILYSKLGCQESKEIRLFLRAKRLRFVEINLDVYPSREKELEKFSGSTSVPKVYFNEILIGGLSELKTLKESGNLDEKIDFLIGEAPLFEAPQPPLSGEDDDSSSGAIDEFAVIVRKMKESIPVKDRFHKMRRFTNCFLGSEAVDFLSEDQYLERPEAVEFGRKLASKLFFYHVLDENIFEDGNHLYRFLDDDPIVASQCYNIPKGIATVKPKPIAEIASRLRFLSYAMFEAYVFEDGRRVDYTSLHASGEFARYLRTVEELQRVEIWDMSREEKLAFFINLYNMMAIHAILVLGHASGAMERRKLFGEFKYVIGGSSYSLSAIQNGILRGNQRPPYNLKKPFGSKDRRLKVALPYPEPLIHFALVCGSRSGPALRCYSPGKIDEELTDAARNFLRSGGILIDLAAKDASANKILKWYSIDFGKSEVEVLKHVSNYLDPSNSEVLLDMLATSEFKVTYQPYEWGLNA* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0754 730 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 729 - -
Amo08g0754 730 SUPERFAMILY Thioredoxin-like 262 342 IPR036249 -
Amo08g0754 730 Pfam Glutaredoxin 264 320 IPR002109 -
Amo08g0754 730 SMART DEP_3 381 454 IPR000591 GO:0035556
Amo08g0754 730 MobiDBLite consensus disorder prediction 189 222 - -
Amo08g0754 730 CDD DEP 373 451 - -
Amo08g0754 730 MobiDBLite consensus disorder prediction 189 217 - -
Amo08g0754 730 Pfam Protein of unknown function, DUF547 532 658 IPR006869 -
Amo08g0754 730 ProSiteProfiles DEP domain profile. 381 454 IPR000591 GO:0035556
Amo08g0754 730 Gene3D - 372 495 IPR036388 -
Amo08g0754 730 Gene3D Glutaredoxin 259 344 - -
Amo08g0754 730 SUPERFAMILY "Winged helix" DNA-binding domain 373 462 IPR036390 -
Amo08g0754 730 MobiDBLite consensus disorder prediction 1 45 - -
Amo08g0754 730 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 10 729 - -
Amo08g0754 730 MobiDBLite consensus disorder prediction 84 131 - -
Amo08g0754 730 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 385 452 IPR000591 GO:0035556
Amo08g0754 730 MobiDBLite consensus disorder prediction 234 254 - -
Amo08g0754 730 MobiDBLite consensus disorder prediction 1 160 - -
Amo08g0754 730 ProSiteProfiles Glutaredoxin domain profile. 252 349 - -
Amo08g0754 730 MobiDBLite consensus disorder prediction 46 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0754 Amo-Chr8 13260494 13264755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0754 - - ccaj:109797380 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0754 08 13260494 13264755 Amo17g2810 17 129867751 129871675 hybridization
Amo17g1772 17 80016856 80030525 Amo08g0754 08 13260494 13264755 PCT
Amo08g0754 08 13260494 13264755 Amo17g1772 17 80016856 80030525 PCT