Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0207 ATGGTTGTTGACAATTGTAAAGATGAAATTGAGGAATCTAATGGAAGTAATAAGGAAATGGAGTTCGTTTCGATAGATTTTTCAACTTCAAGAAGAACGTTGCTGAGCAGCGAAAATCCCCAGAAGAAATTCCAGGGCACCTTGAGTTCCATTCCCAATAGGCTCAATCTCTTCAAATTTGGTTCTGCATCTGCGAAATTCAAGCGGCTTGCAACCTCGAAAGACCAGATTTCACAGGCTGTGCCTTCCCCTCATGGCTTGAGAGGAAGGTTCAGCGGGATGCTCTCTAAGAAACTAGATTGGGGTTCACTCAAGAAGATGTGCATAGAATGGTTTAGGGACCCAATGAACATTGCCCTTTTTGTGTGGATCTTCTGCGTCGCTGTTTCGGGTGCAATTCTATTCCTTGTGATGACTGGAATGTTAAATGCTGTGCTGCCGAAGAAGTCCCAGAGGAATGCATGGTTTGAAGTGAACAATCAAATACTCAATGCACTGTTTACACTTATGTGTTTGTATCAGCACCCACAAAGAGTCTACCACCTTGTTCTTCTGTGCCGATGGAGTCCGAAAGATATCTCAAAACTTAGAAAATTGTATTGCAAGAATGGAACATATAAGCCTCATGAGTGGGCACACATGATGGTGGTGGTGATTCTCCTTCAGTTAAACTGTTTTTCTCAATATGCACTTTGCGGTCTAAATTTGGGGTACAAAAGATCTGAGCGCCCAGCAATAGGAGTCGGAATATGTATGTCTTTTTCGATTGGTGCAGCTGCGACTGCTGGTCTATATACCATTCTTAGCCCTCTTGGTAGAGATTATGATTCTCCAACAGACGAAGAAGCGCAGGTTCGAATTTCTCCTGCTCAAAAGCCACAGGTGAAAACATTTGAGAAGAAATATTCATTTGCAACCCATGATCGTCAAAGGGTAATTGAAACTAGACCTCAGTGGAGTGGAGGAATACTTGACCTTTGGGATGATATCTCTCAGGCTTATCTATCACTTTTCTGCACTTTTTGTGTCTTCGGGTGGAATATGGAGAGACTAGGCTTTGGAAATATGTTTGTTCATATTGCCACTTTTATGCTGTTTTGTATGGCTCCTTTCTGGATTTTTATATTGGCTGCTGTTAATATTGGGGATGATACTGTTAGGCAGGCTCTAGTAGCTACTGGGATTCTTTTGTGCTTTCTTGGTTTACTTTATGGTGGATTTTGGAGGATCCAAATGAGGAAAAGGTTCAATTTGCCTGCTTATGACTTCTGCTTTGGTAAGGCTTCGGCTTCTGATTGCGTACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGTTAGGACTGGGAATACCTATGATGTTGTGGAGGAAAAATTCTCCTTGAAAGAAACTGATATTGGTGAACAACCACCGATTTCTCCTTTGCCGCGCGAAGATGTTGCATCTCCCAACTCCGGCACAAGTTCTCCTCTGGGTACCAACTCTTCCCCTTCTATGATCAAACCACCTAGCCCTCTAAGTTCAAGCAGTGTCTTCAAGGAATATCATAGTCCAAACAGGCCACTATCTACTGTAAAAGAAGAGAATCACGAAAGACGGGAAGAGGGAATGATGAGCCCGCCAATACCACCACTATTACACAGAGAATCTCCCTAA 1662 0.429 MVVDNCKDEIEESNGSNKEMEFVSIDFSTSRRTLLSSENPQKKFQGTLSSIPNRLNLFKFGSASAKFKRLATSKDQISQAVPSPHGLRGRFSGMLSKKLDWGSLKKMCIEWFRDPMNIALFVWIFCVAVSGAILFLVMTGMLNAVLPKKSQRNAWFEVNNQILNALFTLMCLYQHPQRVYHLVLLCRWSPKDISKLRKLYCKNGTYKPHEWAHMMVVVILLQLNCFSQYALCGLNLGYKRSERPAIGVGICMSFSIGAAATAGLYTILSPLGRDYDSPTDEEAQVRISPAQKPQVKTFEKKYSFATHDRQRVIETRPQWSGGILDLWDDISQAYLSLFCTFCVFGWNMERLGFGNMFVHIATFMLFCMAPFWIFILAAVNIGDDTVRQALVATGILLCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKASASDCVLWLCCCWCSLAQEVRTGNTYDVVEEKFSLKETDIGEQPPISPLPREDVASPNSGTSSPLGTNSSPSMIKPPSPLSSSSVFKEYHSPNRPLSTVKEENHERREEGMMSPPIPPLLHRESP* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0207 553 MobiDBLite consensus disorder prediction 522 539 - -
Amo17g0207 553 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 318 450 IPR006461 -
Amo17g0207 553 MobiDBLite consensus disorder prediction 468 553 - -
Amo17g0207 553 MobiDBLite consensus disorder prediction 482 519 - -
Amo17g0207 553 Pfam PLAC8 family 319 449 IPR006461 -
Amo17g0207 553 Pfam Protein of unknown function (DUF2985) 110 188 IPR021369 -
Amo17g0207 553 PANTHER - 18 551 - -
Amo17g0207 553 PANTHER PLAC8 FAMILY PROTEIN-RELATED 18 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0207 Amo-Chr17 3018550 3021424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0207 - - gmx:100795088 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1310 20 27344465 27347253 Amo17g0207 17 3018550 3021424 PCT
Amo10g0875 10 14091738 14094417 Amo17g0207 17 3018550 3021424 PCT
Amo17g0207 17 3018550 3021424 Amo20g1310 20 27344465 27347253 PCT
Amo17g0207 17 3018550 3021424 Amo10g0875 10 14091738 14094417 PCT