Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0875 ATGGTTTTAGTTGATAATAACGGGATTGGGAATACCGGGAATGATGAAACTGCGGAATCTAGTAGGAGTAAAATGGAGTTTGCTTCAGTTGATCTTGCAACTTCACAACAGACAATTCTGAACAGTGAAAATCCTCAGGGAAAGTTCGAAGGCACTGTCTCTAGTTCCCTTTCATGCTGGATCAAGTCCCTAAAATTTGGTTCTGCATCTGCCAAATTAAAACGGCTCACTTCCGARAGAGATCAGATTTCACAATCTGTACCTGCTCCTAGTTCTCATGGCARGAGATCACGATTCAGTAACATGTTTGGTCAGAAACTCGGTTGGGGTTCCGTCAAGAAGGTGTGCATGGAATGGATTAAAAATCCAATGAATATGGCCCTTTTCTTTTGGATAGCCTGTGTTGCTGTCTCGGGTGCAATTCTGTTCCTTGTGATGACAGGCATGTTGAATAATGTGTTGACAAGAAAATCTCAGAGAAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCACTTTTTACGCTTATGTGTTTGTACCAACATCCGAAGCGGTTCTACCACCTTTTTCTTTTGTGTAGATGGAGGCCGAACGACATCTCTAGGTTGCGAAAGATATACTGCAAAAATGGGACTTATAAGCCGAATGAGTGGGTGCACATGATGGTAGTGGTCATTCTCCTTCATGTGAATTGTCTTTCTCAATATGCACTCTGTGGTCTAAACTTGGGGTATAAAAGGTCTGAGAGGCCTGTCATAGGAGTTGGAATATGTGTATCTTTTTCAATTGCTACGCCAGCAATTGCAGGTTTGTACATCATTCTTAGCCCACTTGGGAAGGACTATGATTGCGAGATTGATGAAGAAGCACAGATTCAAACTACATTTTCTCAAAGGCAAGAGCAATTGAGAGAGAAKGCACACGAGAAAATATATTCATTTGCATCCAAGGATCAAGAAAAGATTATTGAAGATAGACCAAAGTGGAYTGGAGGAATTTTTGACATTTGGYACGATATTTCTCTYGCATATCTCTCACTTTTTTGCACTTTCTGTGTCTTTGGGTGGAATATGGAGAGACTTGGATTCGGAAACATGTATGTTCATATTGCCACTTTTATTCTGTTTTGCATTGCACCTTTCTGGATTTTCACATTGGCTGCTGTTAATATTGATGATGARAAAGTTAGACAAGGTCTTGTGGCCATTGGAATCATCCTTTGRTTTTTGGGTTTACTGTATGGTGGATTTTGGAGGATCCGAATGAGAAAGAGGTTCAATTTGCCTGCCTATAAATTCTGTTTTGGTAAACCTTCAGTTTCCGATTGCACTCTTTGGTTTTGTTGTTGGTGGTGCACCCTAGCRCAAGAATTGCGAACTGCAAATAGCTATGATCTTGTTGTAGACGATGAATTCTGCAGGAAAGAAGTTGATACCGACCAACCATCGGCAATTTTGCCCTTGGTTTGTGAAGATGTAGCATCAACCAAATCCGGCACGAGTTCTCCTAAGGGTAACAACTCTTCTCATCTTATGATAGAAACATCTAGACCTCTTAGTTCAAATAACGCCTCAAATGAATATRACAGTTCGAGTAGGTCTCTATCCCTTGTAGAAAATGTAATAATGAATCCACCAACTCAATCAATAATTGAAAGGGAAGCTCCTTAG 1674 0.3996 MVLVDNNGIGNTGNDETAESSRSKMEFASVDLATSQQTILNSENPQGKFEGTVSSSLSCWIKSLKFGSASAKLKRLTSERDQISQSVPAPSSHGXRSRFSNMFGQKLGWGSVKKVCMEWIKNPMNMALFFWIACVAVSGAILFLVMTGMLNNVLTRKSQRNAWFEVNNQILNALFTLMCLYQHPKRFYHLFLLCRWRPNDISRLRKIYCKNGTYKPNEWVHMMVVVILLHVNCLSQYALCGLNLGYKRSERPVIGVGICVSFSIATPAIAGLYIILSPLGKDYDCEIDEEAQIQTTFSQRQEQLREXAHEKIYSFASKDQEKIIEDRPKWXGGIFDIWXDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCIAPFWIFTLAAVNIDDEKVRQGLVAIGIILXFLGLLYGGFWRIRMRKRFNLPAYKFCFGKPSVSDCTLWFCCWWCTLAQELRTANSYDLVVDDEFCRKEVDTDQPSAILPLVCEDVASTKSGTSSPKGNNSSHLMIETSRPLSSNNASNEYXSSSRSLSLVENVIMNPPTQSIIEREAP* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0875 557 Pfam PLAC8 family 330 460 IPR006461 -
Amo10g0875 557 PANTHER - 20 555 - -
Amo10g0875 557 MobiDBLite consensus disorder prediction 498 528 - -
Amo10g0875 557 MobiDBLite consensus disorder prediction 7 22 - -
Amo10g0875 557 MobiDBLite consensus disorder prediction 1 22 - -
Amo10g0875 557 PANTHER PLAC8 FAMILY PROTEIN-RELATED 20 555 - -
Amo10g0875 557 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 329 463 IPR006461 -
Amo10g0875 557 Pfam Protein of unknown function (DUF2985) 118 196 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0875 Amo-Chr10 14091738 14094417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0875 - - gmx:100811964 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1310 20 27344465 27347253 Amo10g0875 10 14091738 14094417 hybridization
Amo10g0875 10 14091738 14094417 Amo17g0207 17 3018550 3021424 PCT
Amo17g0207 17 3018550 3021424 Amo10g0875 10 14091738 14094417 PCT