Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3663 ATGGCCGGGGTTGCTATGACAACTATGGGGAAAACATGGGCTGCAGATGATACCGAATTAGGTTCTTCCAATGGAAAGCGCTCTCTTGTGGGAGATCTTTTTGGCCTTCTTTCAGCTATGTCATATGGTCTATTCACAGTTCTTCTTAAGAAGGTTTCCGGCGAAGAAGGGGAAAGGGTTGATGTGCAAAAGCTGTTTGGATACATTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATTTGGCCTTTGTCAGCCTTAGGAATTGAACCTAAGTTCTCAATTCCTCACTCTGCAAAAGTGGATGAAGTTGTTCTTGCTAACGGATTCGTCGGAAGTGTTCTCTCGGACTATTTCTGGGCACTTTGTGTTGTATGGACTACCCCCCTCGTGGCGACTTTGGGCATGTCACTCACCATTCCTCTTGCCATGTTGGCCGACATGGTGATCCATGGTCGGCATTATTCAGCATTGTACATCCTTGGCTCAATTCAGGTATTTGTAGGGTTTGTGCTTGCTAATCTTTCAGATTGGATGACCAAGAGGTTGCCAGTTCTCATACGAAATTTAATAAATTCGTGGCTTTATTACCATCCCAAAAAGAAAAATGTGGCATTACAGGAGCGGTTCTGA 633 0.4439 MAGVAMTTMGKTWAADDTELGSSNGKRSLVGDLFGLLSAMSYGLFTVLLKKVSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLSALGIEPKFSIPHSAKVDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSIQVFVGFVLANLSDWMTKRLPVLIRNLINSWLYYHPKKKNVALQERF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3663 210 SUPERFAMILY Multidrug resistance efflux transporter EmrE 70 179 - -
Amo16g3663 210 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 182 - -
Amo16g3663 210 PANTHER OSJNBA0070O11.5 PROTEIN 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3663 Amo-Chr16 147457481 147459754 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3663 K15289 - pop:7458384 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3663 16 147457481 147459754 Amo06g2834 06 93655342 93659804 hybridization
Amo16g3663 16 147457481 147459754 Amo08g2139 08 34275354 34279316 PCT
Amo16g3663 16 147457481 147459754 Amo18g3462 18 137741441 137745633 PCT
Amo08g2139 08 34275354 34279316 Amo16g3663 16 147457481 147459754 PCT
Amo18g3462 18 137741441 137745633 Amo16g3663 16 147457481 147459754 PCT