Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2834 ATGGGTTGGAGATACAAAGCTGGGTTGTTTCTTATAGCAACGGTTGTTATTATATGGGTTACCTCCGCTGAAGTTACCCAGGATATTTTTACAGACTATAAGCAGCCATTTGCAGTGACGTATCTCGGAGCTTCTCTTATGGTAGTGTACCTACCGGTCGCATTCATTAAGGACTGGTTATGTAACTTATTTAAACGCCGTTCCTCAAAAGGTGGAAAAAATGAAGCAACCATGGATATGGATTCGGATTCGGGCAATAGCTCTCCTGTCAAAGGCAATGGAGTGCAGAAAAACTTCGAACTGGAACTGGGGAATGTTAGTCGAAAAGATAGTGACTTAGACCTTTCAGCTCTCTCAGAAACAAAGCCATTGGTGGCAAGATATAATGATCCTAATGTGCTAAAGGTTGATAGACCTCTTACTGCAAAAGAAGTTGCTACATATGGATTTTACATTGCTCCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCACGTACAAGTGTTGCTAGTACGACGGTATTATCATCTACCTCAGGACTCTTCACTCTTTTTATCGGTGTGCTTTTGGGCCAAGACACTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGTATGGCCGGGGTAGCTATGACAACTATGGGGAAAACATGGGCTGCAGATGATACCGAATTAGGTTCTTCCAATGGAAAGCGCTCTCTTGTGGGAGATCTTTTTGGCCTTCTTTCAGCTATGTCATATGGTCTATTCACAGTTCTTCTTAAGAAGGTTTCCGGCGAAGAAGGGGAAAGGGTTGATGTGCAAAAGCTGTTTGGATACATTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATTTGGCCTTTGTCAGCCTTAGGAATTGAACCTAAGTTCTCAATTCCTCACTCTGCAAAAGTGGATGAAGTTGTTCTTGCTAACGGATTCGTCGGAAGTGTTCTCTCGGACTATTTCTGGGCACTTTGTGTTGTATGGACTACCCCCCTCGTGGCGACTTTGGGCATGTCACTCACCATTCCTCTTGCCATGTTGGCCGACATGGTGATCCATGGTCGGCATTATTCAGCATTGTACATCCTTGGCTCAATTCAGGTATTTGTAGGGTTTGTGCTTGCTAATCTTTCAGATTGGATGACCAAGAGGTTGCCAGTTCTCATACGAAATTTAATAAATTCGTGGCTTTATTACCATCCCAAAAAGAAAAATGTGGCATTACAGGAGCGGTTCTGA 1260 0.4278 MGWRYKAGLFLIATVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPVAFIKDWLCNLFKRRSSKGGKNEATMDMDSDSGNSSPVKGNGVQKNFELELGNVSRKDSDLDLSALSETKPLVARYNDPNVLKVDRPLTAKEVATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLLGQDTLNVAKVVAVLVSMAGVAMTTMGKTWAADDTELGSSNGKRSLVGDLFGLLSAMSYGLFTVLLKKVSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLSALGIEPKFSIPHSAKVDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSIQVFVGFVLANLSDWMTKRLPVLIRNLINSWLYYHPKKKNVALQERF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2834 419 Pfam EamA-like transporter family 140 217 IPR000620 GO:0016020|GO:0016021
Amo06g2834 419 PANTHER OSJNBA0070O11.5 PROTEIN 1 391 - -
Amo06g2834 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Amo06g2834 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 388 - -
Amo06g2834 419 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 391 - -
Amo06g2834 419 MobiDBLite consensus disorder prediction 70 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2834 Amo-Chr6 93655342 93659804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2834 K15289 - gmx:100792013 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3663 16 147457481 147459754 Amo06g2834 06 93655342 93659804 hybridization
Amo06g2834 06 93655342 93659804 Amo08g2139 08 34275354 34279316 PCT
Amo06g2834 06 93655342 93659804 Amo18g3462 18 137741441 137745633 PCT
Amo08g2139 08 34275354 34279316 Amo06g2834 06 93655342 93659804 PCT
Amo18g3462 18 137741441 137745633 Amo06g2834 06 93655342 93659804 PCT